Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTCAO00442 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.01□□□□□ -1.77
RTCAO00442 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.01□□□□□ -1.77
RTCAO00442 CYB5AP5-201ENST00000549779 389 ntBASIC4.01□□□□□ -1.77
RTCAO00442 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.01□□□□□ -1.77
RTCAO00442 CYP4A43P-201ENST00000568156 121 ntBASIC4.01□□□□□ -1.77
RTCAO00442 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.01□□□□□ -1.77
RTCAO00442 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.01□□□□□ -1.77
RTCAO00442 AL161729.3-201ENST00000603533 673 ntBASIC4.01□□□□□ -1.77
RTCAO00442 ARF4P1-201ENST00000605447 541 ntBASIC4.01□□□□□ -1.77
RTCAO00442 AP000255.1-201ENST00000610276 676 ntBASIC4.01□□□□□ -1.77
RTCAO00442 AC064801.1-201ENST00000612025 407 ntBASIC4.01□□□□□ -1.77
RTCAO00442 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RTCAO00442 AC022960.3-201ENST00000619794 441 ntBASIC4.01□□□□□ -1.77
RTCAO00442 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RTCAO00442 AC004925.1-201ENST00000624256 2706 ntBASIC4.01□□□□□ -1.77
RTCAO00442 AL672296.1-201ENST00000427780 2158 ntBASIC4.01□□□□□ -1.77
RTCAO00442 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.01□□□□□ -1.77
RTCAO00442 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTCAO00442 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RTCAO00442 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTCAO00442 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.01□□□□□ -1.77
RTCAO00442 AC002546.1-201ENST00000588041 2504 ntBASIC4□□□□□ -1.77
RTCAO00442 AL365440.1-201ENST00000436135 2167 ntBASIC4□□□□□ -1.77
RTCAO00442 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RTCAO00442 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RTCAO00442 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RTCAO00442 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 AC117529.2-201ENST00000512159 2068 ntBASIC4□□□□□ -1.77
RTCAO00442 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 U1.1-201ENST00000384101 164 ntBASIC4□□□□□ -1.77
RTCAO00442 RNU6-339P-201ENST00000384310 107 ntBASIC4□□□□□ -1.77
RTCAO00442 AL161909.1-201ENST00000397390 712 ntBASIC4□□□□□ -1.77
RTCAO00442 AL583834.1-201ENST00000406943 343 ntBASIC4□□□□□ -1.77
RTCAO00442 AC106883.1-201ENST00000418805 562 ntBASIC4□□□□□ -1.77
RTCAO00442 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4□□□□□ -1.77
RTCAO00442 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4□□□□□ -1.77
RTCAO00442 CHIAP3-201ENST00000423668 1133 ntBASIC4□□□□□ -1.77
RTCAO00442 IFNNP1-201ENST00000429219 553 ntBASIC4□□□□□ -1.77
RTCAO00442 AC016712.1-201ENST00000431088 378 ntBASIC4□□□□□ -1.77
RTCAO00442 AL662791.1-201ENST00000441992 928 ntBASIC4□□□□□ -1.77
RTCAO00442 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4□□□□□ -1.77
RTCAO00442 AL592437.1-201ENST00000443781 492 ntBASIC4□□□□□ -1.77
RTCAO00442 NDUFAF4P2-201ENST00000445374 520 ntBASIC4□□□□□ -1.77
RTCAO00442 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4□□□□□ -1.77
RTCAO00442 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4□□□□□ -1.77
RTCAO00442 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4□□□□□ -1.77
RTCAO00442 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
RTCAO00442 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 AC108475.1-201ENST00000507880 950 ntBASIC4□□□□□ -1.77
RTCAO00442 AL592156.1-201ENST00000508758 304 ntBASIC4□□□□□ -1.77
RTCAO00442 KCTD9P2-201ENST00000512203 1013 ntBASIC4□□□□□ -1.77
RTCAO00442 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4□□□□□ -1.77
RTCAO00442 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 TRAPPC2P2-201ENST00000517589 409 ntBASIC4□□□□□ -1.77
RTCAO00442 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 LSM6P2-201ENST00000552208 177 ntBASIC4□□□□□ -1.77
RTCAO00442 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4□□□□□ -1.77
RTCAO00442 AC009101.1-201ENST00000568135 242 ntBASIC4□□□□□ -1.77
RTCAO00442 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4□□□□□ -1.77
RTCAO00442 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4□□□□□ -1.77
RTCAO00442 AL022067.1-201ENST00000602426 454 ntBASIC4□□□□□ -1.77
RTCAO00442 AC069431.2-201ENST00000604149 1099 ntBASIC4□□□□□ -1.77
RTCAO00442 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 VIS1.1-201ENST00000610517 203 ntBASIC4□□□□□ -1.77
RTCAO00442 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
RTCAO00442 AL354976.1-201ENST00000613843 387 ntBASIC4□□□□□ -1.77
RTCAO00442 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4□□□□□ -1.77
RTCAO00442 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 AC010608.3-201ENST00000625048 527 ntBASIC4□□□□□ -1.77
RTCAO00442 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4□□□□□ -1.77
RTCAO00442 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4□□□□□ -1.77
RTCAO00442 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4□□□□□ -1.77
RTCAO00442 MTND4P34-201ENST00000572715 1371 ntBASIC4□□□□□ -1.77
RTCAO00442 AC091152.2-201ENST00000591628 2569 ntBASIC4□□□□□ -1.77
RTCAO00442 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTCAO00442 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
RTCAO00442 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 RNU6-619P-201ENST00000365146 108 ntBASIC3.99□□□□□ -1.77
RTCAO00442 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.99□□□□□ -1.77
RTCAO00442 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
RTCAO00442 RNU6-921P-201ENST00000384361 107 ntBASIC3.99□□□□□ -1.77
RTCAO00442 MIR1179-201ENST00000408703 91 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms