Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 FCF1P8-201ENST00000510322 597 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 RNA5SP468-201ENST00000516782 93 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 NPM1P52-201ENST00000518264 846 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AP006245.1-201ENST00000522549 120 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AP001922.4-201ENST00000526967 290 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 OSBPL9P3-201ENST00000534523 595 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC020895.1-201ENST00000595362 272 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL356575.1-201ENST00000603008 283 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC104785.1-201ENST00000603220 588 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC115286.1-201ENST00000604298 434 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AL049779.4-201ENST00000604500 156 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC002076.2-201ENST00000617362 122 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR7848-201ENST00000617402 101 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR7151-201ENST00000617477 60 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC010608.2-201ENST00000624830 470 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 AC139713.2-214ENST00000642059 1811 ntBASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CHKB-CPT1BH3BT56 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC131971.1-201ENST00000332881 1482 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU6-697P-201ENST00000363348 107 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU1-138P-201ENST00000384093 164 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU6-532P-201ENST00000384318 107 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 ARF4P3-201ENST00000397387 509 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU4-65P-201ENST00000410473 140 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 TPT1P2-201ENST00000413105 503 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 TCEA1P4-201ENST00000415066 844 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 YPEL5P1-201ENST00000419731 367 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC012065.2-201ENST00000421295 375 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 BTF3P10-201ENST00000433415 495 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC127537.2-201ENST00000439258 465 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL31P44-201ENST00000447680 377 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RAB28P3-201ENST00000448325 597 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 TPMTP4-201ENST00000450749 678 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 CYCSP53-201ENST00000455540 265 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC023141.9-201ENST00000458734 412 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU7-27P-201ENST00000459281 62 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC010326.1-201ENST00000462726 602 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC090525.1-201ENST00000479116 478 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL37P25-201ENST00000507308 276 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC008565.1-201ENST00000509046 885 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 CDC42P4-201ENST00000510507 563 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 UBE2Q2P10-201ENST00000514854 900 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SKP116-201ENST00000516902 319 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC025881.1-201ENST00000518851 512 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 IGKV2-18-201ENST00000522607 343 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AP002404.1-201ENST00000532005 451 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 APPL2-203ENST00000546731 684 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC128657.1-201ENST00000549459 145 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC006504.3-201ENST00000586818 523 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC083760.1-201ENST00000589621 670 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 DUXAP3-201ENST00000603616 594 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL049829.3-202ENST00000604278 711 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AL590282.1-201ENST00000610379 1136 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC245389.2-201ENST00000616023 576 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC243756.2-201ENST00000618406 463 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC242843.1-201ENST00000618702 573 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms