Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR52E6-202ENST00000379946 954 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNA5SP105-201ENST00000391123 113 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPL7P60-201ENST00000397636 735 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL034403.1-201ENST00000399414 885 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTCYBP7-201ENST00000419540 1134 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPS12P23-201ENST00000419579 400 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC093084.1-201ENST00000424233 687 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 FTH1P6-201ENST00000430768 320 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC099563.1-201ENST00000456086 418 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RPL21P10-201ENST00000463521 490 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 FCF1P3-201ENST00000496394 590 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC021087.2-201ENST00000504656 1203 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC093770.1-201ENST00000511559 571 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR4H6P-202ENST00000603819 340 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC135803.1-201ENST00000608748 565 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP003355.3-201ENST00000623465 114 ntBASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMX2-CTNND1H3BSU7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 RAD1P1-201ENST00000231383 813 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 MIR634-201ENST00000385208 97 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORA40.4-201ENST00000390971 128 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL353692.2-201ENST00000407054 335 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTND4P24-201ENST00000424002 397 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL035458.1-201ENST00000433096 585 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 USP9YP7-201ENST00000436723 430 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 ELOCP10-201ENST00000440624 327 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL627224.1-201ENST00000448334 444 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL353718.1-201ENST00000451028 517 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 USP9YP32-201ENST00000452432 430 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 HMGB3P21-201ENST00000452483 547 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC069277.2-201ENST00000454211 432 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP000893.1-201ENST00000474462 794 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC017015.1-201ENST00000477387 286 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP000926.4-201ENST00000527351 454 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 CKS1BP1-201ENST00000555221 240 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 GTF2IP8-201ENST00000560687 584 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 MIR5186-201ENST00000577504 120 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 MIR3200-201ENST00000580767 85 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC092474.3-201ENST00000603022 568 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 ELOCP34-201ENST00000604436 327 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP004372.1-201ENST00000604842 844 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC004775.1-201ENST00000607389 753 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC092574.1-201ENST00000609771 420 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC092159.4-201ENST00000624944 550 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AP001002.2-201ENST00000625137 386 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC091948.2-201ENST00000636510 279 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC119674.1-207ENST00000641355 633 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC017002.4-201ENST00000604721 1525 ntBASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.48□□□□□ -1.85
TMX2-CTNND1H3BSU7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 RNU1-33P-201ENST00000364249 162 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 RANP4-201ENST00000413361 655 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms