Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CEACAMP1-201ENST00000434624 1035 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL353597.2-202ENST00000434901 373 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 YWHAZP8-201ENST00000436935 731 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC009961.3-201ENST00000449832 765 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL645937.3-201ENST00000453647 936 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 MTND4LP3-201ENST00000468320 276 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC013828.1-201ENST00000481845 158 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC091435.1-201ENST00000505442 584 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 RNY4P37-201ENST00000516225 96 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 RNA5SP228-201ENST00000516232 133 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 OR7K1P-201ENST00000546439 926 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL389895.1-201ENST00000554127 252 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL109766.1-201ENST00000555080 552 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL512347.1-201ENST00000566420 503 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AP005119.2-201ENST00000579735 1105 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL031985.2-201ENST00000600955 480 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC024940.4-201ENST00000605507 246 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AP001521.1-201ENST00000609150 300 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC012409.3-201ENST00000611343 981 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 MIR6780A-201ENST00000615089 68 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC098679.5-201ENST00000624394 571 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL355480.1-201ENST00000629041 99 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC008013.2-202ENST00000637965 364 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 ZNF37BP-203ENST00000452306 1352 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL592148.3-201ENST00000608771 2646 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 OR4K15-201ENST00000305051 1216 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 OR4A15-201ENST00000314706 1035 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SNORA58B-201ENST00000364259 136 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RNVU1-6-201ENST00000364688 164 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 Y_RNA.560-201ENST00000384689 102 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-253P-201ENST00000384730 105 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RPS3AP26-201ENST00000398259 784 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 DSTNP4-201ENST00000399472 474 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 MTCYBP38-201ENST00000417160 1123 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC069213.2-201ENST00000420238 366 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SDCBPP2-201ENST00000424643 885 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RPL23AP52-201ENST00000439311 478 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RPS26P56-201ENST00000444468 240 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 ARL2BPP10-201ENST00000446487 531 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC073264.2-201ENST00000448886 166 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AL162591.2-201ENST00000449634 317 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 USP9YP10-201ENST00000454868 628 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SETP11-201ENST00000473027 690 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 RPS6P4-201ENST00000494693 758 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC092045.1-201ENST00000495716 1231 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 OR2A20P-203ENST00000498397 1268 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC104685.1-201ENST00000502445 371 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC025554.1-201ENST00000505641 188 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC093281.2-201ENST00000510153 597 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LTV1P1-201ENST00000510683 1237 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 USP9YP5-201ENST00000511770 630 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 OR5D15P-201ENST00000531671 942 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 SULT1C2P1-202ENST00000562418 459 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC107982.3-201ENST00000584957 985 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC005191.1-201ENST00000603950 358 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC012557.2-201ENST00000605919 418 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC116651.1-201ENST00000609724 556 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC015813.4-201ENST00000610469 179 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AL359535.1-201ENST00000612100 1087 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC008083.4-201ENST00000615076 444 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AL031667.3-201ENST00000620124 655 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms