Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHBDD3Q9Y3P4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 HSPE1P8-201ENST00000406997 288 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RPL23AP47-201ENST00000408017 460 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RPL30P2-201ENST00000414021 291 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RPL21P66-201ENST00000426566 466 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 YY1P1-201ENST00000427625 668 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 Z74696.2-201ENST00000436514 498 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 HMGN2P20-201ENST00000437531 273 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC006326.1-201ENST00000445465 787 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RPL23AP23-201ENST00000452590 471 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CABYRP1-201ENST00000465493 1045 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC087879.1-201ENST00000474343 374 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CEACAMP10-202ENST00000495431 496 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO2P32-201ENST00000514865 403 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO1P35-201ENST00000515270 228 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC083923.1-201ENST00000523708 376 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC099489.2-201ENST00000574976 260 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 OR4G1P-201ENST00000588632 938 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AL137849.1-201ENST00000604767 169 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AL592436.1-201ENST00000605135 558 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AL590282.1-201ENST00000610379 1136 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC092608.3-201ENST00000625017 386 ntBASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
RHBDD3Q9Y3P4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 PRO1804-201ENST00000623780 2050 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 SPRR2C-201ENST00000290702 219 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 MIR372-201ENST00000362225 67 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 RNA5SP97-201ENST00000365006 84 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 RNU1-13P-201ENST00000384499 162 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 TATDN1P1-201ENST00000414123 891 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AL117339.2-201ENST00000430475 180 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 MOB1AP1-201ENST00000430903 535 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 OR4C10P-201ENST00000434991 931 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 FABP5P3-201ENST00000437960 408 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC004865.1-201ENST00000442276 1003 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 RPS27P5-201ENST00000444247 244 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 TPT1P12-201ENST00000448968 492 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC098824.1-201ENST00000453565 980 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 FTH1P21-201ENST00000512179 511 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 RNA5SP208-201ENST00000516156 78 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 SUMO2P20-201ENST00000520803 283 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC008489.1-201ENST00000524271 483 ntBASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDD3Q9Y3P4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms