Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AL118496.1-201ENST00000440201 1812 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 PRRC2CP1-201ENST00000404428 159 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 MIR1193-201ENST00000408109 78 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 RPL23AP39-201ENST00000415533 405 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 LINC00993-201ENST00000420453 540 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 CENPIP1-201ENST00000425713 902 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 RSL24D1P6-201ENST00000426934 401 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AL589823.1-201ENST00000429577 183 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC010881.1-201ENST00000433830 235 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AL024509.2-201ENST00000493462 493 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AK3P4-201ENST00000504283 583 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 MTATP6P22-201ENST00000507369 598 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 MTCO3P7-201ENST00000510008 774 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 RNU6-709P-201ENST00000517257 104 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC106038.2-201ENST00000520706 568 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 HIGD1AP10-201ENST00000527837 282 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 SLC2A13P1-201ENST00000531560 322 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 MIR4277-201ENST00000578298 84 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AC020914.6-201ENST00000594327 272 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 RNF138P2-201ENST00000603490 592 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 AL158063.1-201ENST00000615349 536 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 MIR6830-201ENST00000636015 70 ntBASIC4.6□□□□□ -1.67
VPS4AQ9UN37 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS4AQ9UN37 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 Y_RNA.25-201ENST00000362528 102 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 Y_RNA.194-201ENST00000363985 102 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 Y_RNA.505-201ENST00000384489 102 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AL357515.1-201ENST00000402967 542 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 MIR1284-201ENST00000408337 120 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 TBCAP2-201ENST00000416175 326 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 ATG4AP1-201ENST00000416893 538 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC073136.2-201ENST00000417282 849 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AF186996.5-201ENST00000418098 904 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC008280.1-201ENST00000418851 412 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 MTCO3P1-205ENST00000422088 832 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RPL37P1-201ENST00000432310 284 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RPL12P46-201ENST00000436610 195 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RPS26P2-201ENST00000440331 348 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC000111.2-201ENST00000448200 210 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AP000893.1-201ENST00000474462 794 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 SNX5P1-201ENST00000505757 1041 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RPL7L1P13-201ENST00000511702 739 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 RNU6-202P-201ENST00000515998 96 ntBASIC4.59□□□□□ -1.67
VPS4AQ9UN37 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4AQ9UN37 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 274.4 ms