Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 AC009962.1-201ENST00000567327 3813 ntBASIC5.4□□□□□ -1.55
MBD1Q9UIS9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
MBD1Q9UIS9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 MTCO1P9-201ENST00000505577 1534 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC093775.1-201ENST00000624154 1868 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 Y_RNA.67-201ENST00000362870 100 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RNU6-582P-201ENST00000362989 107 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 U8.3-201ENST00000363321 132 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RNY3P3-201ENST00000363816 102 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RNA5SP487-201ENST00000410186 122 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC004987.3-201ENST00000413879 771 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 BOLA3P4-201ENST00000418151 400 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RIMKLBP2-201ENST00000424737 654 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC104837.2-201ENST00000427236 424 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 ISCA1P6-201ENST00000427740 390 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 NPM1P34-201ENST00000428821 893 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 SKP1P1-201ENST00000438081 489 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RPL31P44-201ENST00000447680 377 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RPL23AP20-201ENST00000447965 421 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RPS4XP20-201ENST00000505751 772 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC105029.1-201ENST00000520250 669 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC138832.1-201ENST00000522871 556 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC013828.2-201ENST00000532487 235 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC243972.3-201ENST00000539655 198 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AL845331.3-202ENST00000562856 261 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 MIR4330-201ENST00000579077 105 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC087783.2-201ENST00000605070 562 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC011816.2-201ENST00000607089 556 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AP004247.3-201ENST00000608682 624 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RMST_3.1-201ENST00000611651 109 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 MIR1302-1-201ENST00000637932 143 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC119674.1-212ENST00000641155 993 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC003973.3-201ENST00000624863 2822 ntBASIC5.39□□□□□ -1.55
MBD1Q9UIS9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MBD1Q9UIS9 AC239868.2-201ENST00000564237 4527 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 CCT8P1-201ENST00000413611 1657 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 OR52B1P-201ENST00000316506 909 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 RNA5SP123-201ENST00000363244 119 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 RNU6-666P-201ENST00000363499 107 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 SNORA51.8-201ENST00000384234 132 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 MIR1303-201ENST00000408625 86 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 RN7SKP17-201ENST00000411242 351 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL359704.1-201ENST00000411586 781 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL360081.1-201ENST00000428299 555 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 GTF2IP20-201ENST00000431663 360 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL365400.1-201ENST00000431854 640 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 HMGB3P12-201ENST00000438745 556 ntBASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.38□□□□□ -1.55
MBD1Q9UIS9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms