Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 AC104072.1-201ENST00000568817 668 ntBASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 MRPS35P3-201ENST00000603189 709 ntBASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBEC3BQ9UH17 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC027287.1-201ENST00000553115 1453 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 ATP5F1P4-201ENST00000397288 746 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 HMGB1P13-201ENST00000406019 642 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC069282.1-201ENST00000411911 526 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC105402.1-201ENST00000413336 545 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 BX664727.1-201ENST00000416024 466 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 ELOCP6-201ENST00000429066 328 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 PRSS3P4-201ENST00000453323 162 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 UBDP1-202ENST00000457888 382 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 ELOCP12-201ENST00000458706 328 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AP000873.1-201ENST00000463987 400 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC006511.1-201ENST00000470614 315 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC108941.1-201ENST00000502853 530 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC112198.4-201ENST00000515450 351 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 SOD1P3-201ENST00000518682 454 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AP003102.1-201ENST00000525638 661 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC019227.1-201ENST00000526902 510 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC068339.2-201ENST00000534395 618 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 MIR548Y-201ENST00000582739 110 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 BNIP3P31-201ENST00000604515 566 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 RMST_10.1-201ENST00000616309 154 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC016957.2-201ENST00000616998 848 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC007342.8-201ENST00000623278 678 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AL359715.5-201ENST00000623431 443 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 AC138649.5-201ENST00000637456 137 ntBASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBEC3BQ9UH17 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 MIR23A-201ENST00000385245 73 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 SNORA11.1-201ENST00000408133 129 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 ATP5A1P2-201ENST00000412323 255 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC068533.1-201ENST00000418542 415 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC114814.2-201ENST00000419195 485 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 YWHAEP5-201ENST00000431545 765 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 MTCO1P43-201ENST00000431831 488 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC097499.1-201ENST00000444277 208 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 HMGB3P22-202ENST00000451823 572 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 HMGB3P30-201ENST00000457863 606 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC092451.1-201ENST00000480211 153 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AC106707.2-201ENST00000484182 374 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 RPS26P15-201ENST00000488067 348 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 MTCO3P27-201ENST00000514397 196 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.67□□□□□ -1.82
APOBEC3BQ9UH17 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms