Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORD6-201ENST00000365444 73 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 BOLA3P4-201ENST00000418151 400 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 NANOGNBP1-201ENST00000448444 480 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 EIF4A1P11-201ENST00000451239 222 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC023598.1-201ENST00000472521 361 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 TRBV8-1-201ENST00000481590 279 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 RPS3AP14-201ENST00000483907 780 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 FTH1P9-201ENST00000513251 355 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC026801.2-201ENST00000515352 425 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 AF131215.7-201ENST00000602443 707 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.92
CCDC88CQ9P219 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 PWAR6-201ENST00000552334 4618 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 CR383658.2-201ENST00000547576 1525 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 MTND4LP21-201ENST00000415303 295 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC244033.1-201ENST00000426826 870 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 HMGB3P8-201ENST00000449709 577 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 RPL6P9-201ENST00000466502 859 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 RN7SL594P-201ENST00000470590 287 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 HMGB1P21-201ENST00000502313 581 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AP001207.2-201ENST00000519490 539 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 OR4A2P-201ENST00000527276 913 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 CD24P2-201ENST00000565486 219 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC016252.1-201ENST00000609721 474 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC006386.2-201ENST00000624491 75 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC012005.1-201ENST00000624575 75 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AL645568.2-201ENST00000432815 1337 ntBASIC3.08□□□□□ -1.92
CCDC88CQ9P219 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC88CQ9P219 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 Z83843.1-201ENST00000604070 3685 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 OR13C3-201ENST00000374781 1108 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 SNORA48.5-201ENST00000391143 135 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC004801.2-202ENST00000463559 283 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 HMGB3P14-201ENST00000494195 599 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 snoU109.6-201ENST00000516831 118 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 RN7SKP116-201ENST00000516902 319 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 YPEL5P2-201ENST00000605553 359 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 RNU6-673P-201ENST00000365084 104 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 UBE2V2P4-201ENST00000447495 259 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC243772.1-201ENST00000451620 410 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC114982.2-201ENST00000461396 358 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AC091515.1-201ENST00000548110 679 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 NCAPGP2-201ENST00000557911 754 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AL161912.3-201ENST00000605404 628 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AL162274.2-201ENST00000614406 332 ntBASIC3.07□□□□□ -1.92
CCDC88CQ9P219 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC88CQ9P219 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 SRP72P2-201ENST00000344851 1979 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 RPL35AP12-201ENST00000425362 338 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms