Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CISHQ9NSE2 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 LINC01881-201ENST00000416103 412 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 BX890604.2-201ENST00000427883 474 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC105402.2-201ENST00000438503 358 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 SNRPGP5-201ENST00000456003 220 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 RN7SL863P-201ENST00000462370 296 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC109925.1-201ENST00000478069 331 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC106872.2-201ENST00000494303 480 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC108471.1-201ENST00000513977 287 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 NPM1P52-201ENST00000518264 846 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AP001207.2-201ENST00000519490 539 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 MIR4458-201ENST00000578872 75 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 MIR4512-201ENST00000583257 77 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 AL159169.3-201ENST00000608871 561 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 SNORD56.3-201ENST00000363507 71 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC006960.1-201ENST00000419980 153 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 BX510359.1-201ENST00000456973 237 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 EIF2S2P4-201ENST00000461070 984 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 HAUS1P1-201ENST00000505275 832 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 FTH1P9-201ENST00000513251 355 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 BNIP3P33-201ENST00000598912 569 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC012468.1-201ENST00000604888 430 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC138932.5-201ENST00000617759 563 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AL713922.2-201ENST00000619384 716 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CISHQ9NSE2 AC007342.7-201ENST00000624610 2337 ntBASIC3.38□□□□□ -1.87
CISHQ9NSE2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.38□□□□□ -1.87
CISHQ9NSE2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CISHQ9NSE2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC100871.1-201ENST00000507871 1456 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 RNU1-87P-201ENST00000363727 170 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 SNORD46.1-201ENST00000364139 104 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC245291.1-201ENST00000419501 328 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 CACYBPP1-201ENST00000438592 684 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 RN7SL504P-201ENST00000494496 287 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 OR5H3P-201ENST00000502817 919 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 RNA5SP309-201ENST00000516670 106 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AP000919.1-202ENST00000581139 1264 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC009303.3-201ENST00000591103 736 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC007179.3-201ENST00000604976 235 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.37□□□□□ -1.87
CISHQ9NSE2 AL592494.3-201ENST00000609485 464 ntBASIC3.37□□□□□ -1.87
CISHQ9NSE2 AL591516.1-201ENST00000611326 274 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms