Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL606537.1-201ENST00000607258 2011 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC119751.3-201ENST00000399720 670 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 Z75741.2-201ENST00000417272 1167 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RPS27AP12-201ENST00000429552 465 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RPL7P34-201ENST00000433316 712 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 SKP1P1-201ENST00000438081 489 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 MTCYBP11-201ENST00000447254 1109 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 TRBV8-2-201ENST00000475637 270 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC093534.1-201ENST00000504977 132 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC005798.1-201ENST00000513715 387 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC119751.5-201ENST00000514077 770 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 MTCO1P35-201ENST00000515270 228 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC023050.2-201ENST00000544968 387 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 MTND4LP24-201ENST00000572277 291 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 MTND3P13-201ENST00000574391 343 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RN7SL703P-201ENST00000578485 302 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AL583856.2-201ENST00000606298 543 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC016877.3-201ENST00000606778 504 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC092106.3-201ENST00000611308 722 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 uc_338.9-201ENST00000617424 182 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 AC138393.1-206ENST00000540997 1886 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 RNF6P1-201ENST00000444889 1784 ntBASIC4.06□□□□□ -1.76
SIX2Q9NPC8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
SIX2Q9NPC8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MIR525-201ENST00000384978 85 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MTCO2P31-201ENST00000402702 684 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 PPIAP31-201ENST00000405422 495 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MIR1303-201ENST00000408625 86 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC010099.3-201ENST00000423896 409 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MOB1AP1-201ENST00000430903 535 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC234064.1-201ENST00000436312 247 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 FGF7P3-201ENST00000454645 303 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 CEACAMP10-202ENST00000495431 496 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP000859.1-201ENST00000525536 307 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 MRPS36P5-201ENST00000551909 298 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC136624.4-201ENST00000573044 370 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC099489.2-201ENST00000574976 260 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC015688.2-201ENST00000584523 262 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC061975.8-201ENST00000587058 721 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AP001542.2-201ENST00000593141 364 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 PCNAP1-202ENST00000595299 752 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 VN1R83P-201ENST00000595685 445 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC091057.2-201ENST00000602594 792 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AL606490.9-201ENST00000603331 271 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AL392112.1-201ENST00000605115 829 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 AC007349.4-201ENST00000608114 532 ntBASIC4.05□□□□□ -1.76
SIX2Q9NPC8 BX323046.1-201ENST00000610145 535 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms