Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ZYXP1-201ENST00000617638 118 ntBASIC3.44□□□□□ -1.86
CCNB1IP1Q9NPC3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCNB1IP1Q9NPC3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
CCNB1IP1Q9NPC3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCNB1IP1Q9NPC3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
CCNB1IP1Q9NPC3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 RNU1-13P-201ENST00000384499 162 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 EI24P1-201ENST00000416584 867 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 RPS15AP6-201ENST00000420703 385 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 ARL2BPP3-201ENST00000421226 480 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC244098.2-201ENST00000422068 99 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 YY1P1-201ENST00000427625 668 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 SETP5-201ENST00000437270 562 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC006994.1-201ENST00000438212 839 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 MRPS31P2-201ENST00000451581 518 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 GAPDHP36-201ENST00000480688 918 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC008885.2-201ENST00000509506 930 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 PDCL2P2-201ENST00000533651 189 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AL442163.2-201ENST00000553912 710 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 STMN1P1-201ENST00000617809 440 ntBASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCNB1IP1Q9NPC3 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 RN7SKP227-201ENST00000364445 330 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 HMGB3P18-201ENST00000406327 590 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 RPL31P2-201ENST00000413849 377 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 MTND2P16-201ENST00000419987 799 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC005517.2-201ENST00000424673 553 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL117339.2-201ENST00000430475 180 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 UBE2V1P1-201ENST00000430836 445 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 TBCAP1-201ENST00000436520 327 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 RPS4XP22-201ENST00000480755 780 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 RPS4XP15-201ENST00000489210 795 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 HMGB3P14-201ENST00000494195 599 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AP000926.4-201ENST00000527351 454 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 SERPINE4P-201ENST00000554978 281 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC136624.4-201ENST00000573044 370 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 MIR5047-201ENST00000579212 100 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 YWHAQP7-201ENST00000603536 658 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL163642.2-201ENST00000604722 1019 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL354760.1-201ENST00000608357 643 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 MIR8058-201ENST00000615737 89 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AL162233.1-201ENST00000620014 944 ntBASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.42□□□□□ -1.86
CCNB1IP1Q9NPC3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 EIF5P1-201ENST00000400019 1231 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC069218.2-201ENST00000411665 344 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 HMGB3P20-201ENST00000417997 600 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 TCEA1P2-201ENST00000420496 906 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms