Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.58□□□□□ -2
SND1-IT1Q9HBX3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SND1-IT1Q9HBX3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.58□□□□□ -2
SND1-IT1Q9HBX3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC079741.1-201ENST00000321498 212 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RNA5SP295-201ENST00000362655 121 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MIR184-201ENST00000384962 84 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MIR16-1-201ENST00000385271 89 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MIR550A3-201ENST00000390735 95 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RNU6-328P-201ENST00000390887 106 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL391417.1-201ENST00000404100 426 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MTCO3P31-201ENST00000405526 789 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RN7SKP285-201ENST00000410137 318 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 HSPE1P12-201ENST00000412576 301 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL445183.3-201ENST00000414168 502 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC002075.2-201ENST00000425207 252 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RPL21P66-201ENST00000426566 466 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RPP40P1-201ENST00000426762 456 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 BTF3P10-201ENST00000433415 495 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL662791.1-201ENST00000441992 928 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RANP8-201ENST00000444720 713 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL096803.2-201ENST00000450032 677 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 Z99714.1-201ENST00000450463 807 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC078857.1-201ENST00000469870 667 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 RNU6-1073P-201ENST00000517182 106 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC091515.1-201ENST00000548110 679 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AP002906.1-201ENST00000603405 233 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 DPRXP5-201ENST00000604662 539 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AL354976.1-201ENST00000613843 387 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MIR7151-201ENST00000617477 60 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 SGO1P1-201ENST00000603525 1447 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 ZNF849P-201ENST00000594711 1566 ntBASIC2.57□□□□□ -2
SND1-IT1Q9HBX3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 RNU6-619P-201ENST00000365146 108 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 RNU6-481P-201ENST00000384194 107 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 Y_RNA.493-201ENST00000384422 102 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 MIR649-201ENST00000384843 97 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 SNORD65C-201ENST00000390962 71 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 TMSB4XP8-201ENST00000402089 135 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AL121978.1-201ENST00000402778 359 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AL583834.1-201ENST00000406943 343 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 TMSB4XP6-201ENST00000415187 135 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 LIPT1P1-201ENST00000415870 1186 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 TMSB4XP1-201ENST00000424567 135 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AL590762.4-201ENST00000425885 253 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AC006455.6-201ENST00000426192 893 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AC006548.1-201ENST00000427470 102 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 MRPS18BP2-201ENST00000434310 759 ntBASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.56□□□□□ -2
SND1-IT1Q9HBX3 AC006466.1-201ENST00000438721 289 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms