Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC010307.1-201ENST00000467206 836 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC104689.1-201ENST00000473356 768 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 LTV1P1-201ENST00000510683 1237 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RNU6-678P-201ENST00000516832 109 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 TRAV15-201ENST00000556680 249 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 MIR4715-201ENST00000584117 79 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AP002360.3-201ENST00000607673 710 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC073114.1-201ENST00000612027 490 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC005332.6-201ENST00000613178 446 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AL158196.1-201ENST00000616786 434 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC009237.17-201ENST00000618111 748 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC243756.2-201ENST00000618406 463 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC116563.2-201ENST00000624751 535 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 CR392039.4-201ENST00000624968 501 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 DBF4P1-201ENST00000412976 1892 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 OR56B2P-202ENST00000641377 2453 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC092162.3-201ENST00000624511 1624 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RNA5SP397-201ENST00000391323 118 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 TPT1P2-201ENST00000413105 503 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CEACAMP8-201ENST00000413902 580 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC234782.4-201ENST00000417646 1048 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC009237.2-201ENST00000421358 284 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 EIF4EP1-201ENST00000422311 642 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CENPIP1-201ENST00000425713 902 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RPL31P54-201ENST00000429803 370 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL590103.1-201ENST00000434488 307 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC004865.1-201ENST00000442276 1003 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 DDX39BP2-208ENST00000453923 258 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RPL21P71-201ENST00000465598 459 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL672167.3-201ENST00000465951 960 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RPL12P20-201ENST00000475538 479 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RPL23AP65-201ENST00000475608 468 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 RPL7P38-201ENST00000488396 739 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC018552.3-201ENST00000567416 561 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC138915.2-201ENST00000569776 97 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AP005119.2-201ENST00000579735 1105 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC091178.1-203ENST00000584586 279 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AF131215.7-201ENST00000602443 707 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC005191.1-201ENST00000603950 358 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC091488.1-201ENST00000604239 660 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL356218.2-201ENST00000605264 187 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC008966.2-201ENST00000606157 453 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL158063.1-201ENST00000615349 536 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 U3.53-201ENST00000628922 216 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 PCMTD1P7-201ENST00000634506 357 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 AL592148.3-201ENST00000608771 2646 ntBASIC4.69□□□□□ -1.66
USP29Q9HBJ7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USP29Q9HBJ7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms