Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MTCO1P19-201ENST00000443487 500 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 RNU7-140P-201ENST00000459546 60 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC068724.1-201ENST00000487100 792 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC104685.1-201ENST00000502445 371 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC021146.8-201ENST00000507455 733 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 OR5H4P-201ENST00000510851 923 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 PRELID3BP4-201ENST00000515476 571 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MTND4LP26-201ENST00000518144 282 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MYL12AP1-201ENST00000518490 515 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MTCO3P15-201ENST00000526563 574 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC068135.2-201ENST00000569293 1028 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC022662.1-201ENST00000580252 331 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 VN1R83P-201ENST00000595685 445 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL392112.1-201ENST00000605115 829 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL591034.3-201ENST00000605511 685 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AC011472.4-201ENST00000615848 491 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AL590240.3-201ENST00000621416 943 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.57□□□□□ -1.68
EBF3Q9H4W6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.57□□□□□ -1.68
EBF3Q9H4W6 VPS35P1-201ENST00000563400 1518 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 MIR448-201ENST00000362131 111 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RNU6-157P-201ENST00000383957 107 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 SNORA68.2-201ENST00000391263 128 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 HMGB3P18-201ENST00000406327 590 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RNA5SP317-201ENST00000410176 116 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RNA5SP311-201ENST00000411290 116 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 GSTM3P2-201ENST00000412746 530 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 NRBF2P2-201ENST00000413087 861 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC105402.1-201ENST00000413336 545 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 TCEA1P4-201ENST00000415066 844 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL049610.1-201ENST00000423374 372 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RAC1P8-201ENST00000427086 527 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 MTATP6P13-201ENST00000438531 667 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RPL23AP52-201ENST00000439311 478 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL450263.2-201ENST00000439400 589 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 CDC27P1-201ENST00000445384 715 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC007537.2-201ENST00000472093 511 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC011825.1-201ENST00000484967 388 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RNA5SP315-201ENST00000516340 116 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 RNA5SP312-201ENST00000517068 116 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC234778.2-201ENST00000566241 354 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC006362.1-201ENST00000567392 174 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC015912.2-201ENST00000571053 181 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC073544.2-201ENST00000601155 540 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL139418.1-201ENST00000613613 177 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL158163.1-201ENST00000603915 1649 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
EBF3Q9H4W6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 MTND5P24-201ENST00000438892 1767 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 MAPK10-286ENST00000641208 8747 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC139769.1-204ENST00000472297 1931 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms