Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNORA77-201ENST00000408716 125 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 MTND1P21-201ENST00000412991 285 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL807761.1-201ENST00000417622 171 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 FABP7P1-201ENST00000424004 391 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SDCBPP2-201ENST00000424643 885 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 NPM1P24-201ENST00000428039 894 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 MRPS10P2-201ENST00000431226 381 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 PDSS1P2-201ENST00000449397 678 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL354710.1-201ENST00000453641 246 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SNRPFP4-201ENST00000456366 242 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC092757.1-201ENST00000467293 467 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC126182.1-201ENST00000478134 357 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 TMED11P-201ENST00000479478 690 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 RPL7AP10-201ENST00000481016 791 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC109462.1-201ENST00000491087 368 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC138853.1-201ENST00000503549 823 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SNRPCP2-201ENST00000504370 475 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC006499.2-201ENST00000513470 337 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 RNU6-150P-201ENST00000516237 95 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 NPM1P6-201ENST00000521088 871 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC012339.2-201ENST00000523996 453 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL389895.1-201ENST00000554127 252 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC090515.3-201ENST00000560431 315 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC141257.3-201ENST00000572906 215 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 MIR4697-201ENST00000582977 78 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC006272.2-201ENST00000594725 163 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC126118.1-201ENST00000607744 628 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC024941.1-201ENST00000612250 334 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AL603839.4-201ENST00000624658 1005 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC093591.3-201ENST00000634516 308 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 HSPA8P18-201ENST00000439846 1928 ntBASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AMBRA1Q9C0C7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 SCARNA15-201ENST00000607520 4325 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 RPL23P2-201ENST00000320371 421 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 U8.4-201ENST00000363626 134 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 RPL39P6-201ENST00000448289 150 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC093392.2-201ENST00000450682 337 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL033528.1-201ENST00000453780 140 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 LARP1BP2-201ENST00000486594 519 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC021678.1-201ENST00000505195 936 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 OR4A12P-201ENST00000530847 918 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL133241.1-201ENST00000556832 487 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 990 ms