Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 MIR1269B-201ENST00000580405 75 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC012507.3-201ENST00000603556 477 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AL442067.2-201ENST00000614033 363 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC139792.3-201ENST00000623525 224 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC027228.2-201ENST00000567141 2154 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 GNG5P1-201ENST00000255500 204 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RNU6-657P-201ENST00000383904 107 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.481-201ENST00000384373 102 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RNU2-28P-201ENST00000410457 189 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RPL12P17-201ENST00000432393 498 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 CFL1P1-202ENST00000432948 411 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RPL23AP16-201ENST00000441715 421 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RPL23AP20-201ENST00000447965 421 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 UBA52P7-201ENST00000486088 380 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 RPL39P36-201ENST00000490784 156 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC006390.1-201ENST00000508068 283 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 FGF7P4-201ENST00000509595 295 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 BX510359.5-201ENST00000515651 304 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AP000790.1-201ENST00000528891 737 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC090502.2-201ENST00000549267 280 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 TPMTP1-201ENST00000592307 737 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 CKS1BP3-201ENST00000600888 237 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC244107.2-201ENST00000611773 76 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC109583.2-201ENST00000617367 129 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AC009268.2-201ENST00000621925 457 ntBASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXP3Q9BZS1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
FOXP3Q9BZS1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
FOXP3Q9BZS1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 C4BPAP1-201ENST00000415474 1893 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 CASC19-221ENST00000641309 1382 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 Y_RNA.72-201ENST00000362894 103 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 SNORA63-201ENST00000363450 132 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 Y_RNA.460-201ENST00000384255 102 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 RNU6-171P-201ENST00000384354 107 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 MIR551A-201ENST00000385042 96 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 RNU6-908P-201ENST00000410160 94 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 AF228730.4-201ENST00000421457 183 ntBASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXP3Q9BZS1 AL445669.1-201ENST00000426743 755 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms