Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.78□□□□□ -1.64
SCAPERQ9BY12 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.78□□□□□ -1.64
SCAPERQ9BY12 NRBF2P5-201ENST00000603087 788 ntBASIC4.78□□□□□ -1.64
SCAPERQ9BY12 PRELID3BP8-201ENST00000604148 295 ntBASIC4.78□□□□□ -1.64
SCAPERQ9BY12 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.78□□□□□ -1.64
SCAPERQ9BY12 AC131238.1-201ENST00000617135 328 ntBASIC4.78□□□□□ -1.64
SCAPERQ9BY12 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.78□□□□□ -1.64
SCAPERQ9BY12 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SCAPERQ9BY12 AL359693.1-201ENST00000614959 2407 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC000403.1-201ENST00000613696 3585 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 RNU4-82P-201ENST00000362443 140 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 NUP35P1-201ENST00000422734 947 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC073069.1-201ENST00000428657 441 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC016696.1-201ENST00000446949 318 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC068724.1-201ENST00000487100 792 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 FCF1P3-201ENST00000496394 590 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AP000859.1-201ENST00000525536 307 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC106785.3-201ENST00000564064 847 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC099489.2-201ENST00000574976 260 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 uc_338.1-201ENST00000612113 180 ntBASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCAPERQ9BY12 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 RNU1-87P-201ENST00000363727 170 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AC093156.1-201ENST00000440382 670 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 HMGN2P7-201ENST00000456186 273 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AC021205.2-201ENST00000480069 347 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 CYP2C60P-201ENST00000566088 139 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AC009101.1-201ENST00000568135 242 ntBASIC4.76□□□□□ -1.65
SCAPERQ9BY12 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.76□□□□□ -1.65
SCAPERQ9BY12 HMGB3P18-201ENST00000406327 590 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 SLC31A1P1-201ENST00000451221 567 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 RPL23AP67-201ENST00000465341 474 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 ATP1B3P1-201ENST00000605365 821 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AC022960.2-201ENST00000616300 666 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 AL359757.2-201ENST00000624309 274 ntBASIC4.75□□□□□ -1.65
SCAPERQ9BY12 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.75□□□□□ -1.65
SCAPERQ9BY12 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AL451142.2-201ENST00000429076 2090 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC005183.1-201ENST00000603687 1979 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 RPL23AP82-202ENST00000427528 469 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AP000936.3-201ENST00000438127 255 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 CENPBD1P1-201ENST00000464061 469 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 RNA5SP367-201ENST00000516557 118 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 RNU6-1231P-201ENST00000517185 103 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC107934.2-201ENST00000518653 310 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 MIR4738-201ENST00000579134 87 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 ELOCP29-201ENST00000588193 334 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 VN1R90P-201ENST00000595717 726 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC136601.2-201ENST00000604356 474 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 AC090971.4-201ENST00000560291 1800 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCAPERQ9BY12 MTCO1P8-201ENST00000416914 1523 ntBASIC4.74□□□□□ -1.65
SCAPERQ9BY12 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.73□□□□□ -1.65
SCAPERQ9BY12 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms