Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 HMGB1P37-201ENST00000439613 609 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 USP9YP32-201ENST00000452432 430 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 RN7SL132P-201ENST00000478131 296 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC026414.1-201ENST00000504046 698 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC091860.1-201ENST00000505723 432 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 FTH1P21-201ENST00000512179 511 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC010376.1-201ENST00000522101 334 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC022790.1-201ENST00000522872 204 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC104417.1-201ENST00000523974 751 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC118942.1-201ENST00000529674 1035 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC006518.1-201ENST00000541449 943 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 SERPINE4P-201ENST00000554978 281 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC067959.1-201ENST00000604334 379 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC024933.1-201ENST00000608472 348 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AL121652.1-201ENST00000608851 448 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 AC128687.2-201ENST00000609657 566 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 MIR6500-201ENST00000622700 86 ntBASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2Q9BSQ5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 MIR122-201ENST00000385044 85 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 SNORA57.1-201ENST00000391227 145 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AL356967.1-201ENST00000406305 431 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC004022.2-201ENST00000413824 193 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 BTF3P8-201ENST00000414577 526 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 PAICSP7-201ENST00000419829 962 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC023347.2-201ENST00000433994 462 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 RPL21P133-201ENST00000443666 476 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 PRDX3P4-201ENST00000470828 747 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 RPS27P23-201ENST00000487608 251 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC010460.1-201ENST00000507087 466 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC110792.2-201ENST00000510278 224 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 SNORA19.3-201ENST00000516165 130 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC120057.2-201ENST00000571520 271 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC053481.4-201ENST00000583164 216 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AP001542.2-201ENST00000593141 364 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AL392112.1-201ENST00000605115 829 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC018754.1-201ENST00000607486 925 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC093673.2-201ENST00000609674 331 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC084824.4-201ENST00000620106 731 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AC099654.9-201ENST00000637055 678 ntBASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2Q9BSQ5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 RNA5SP97-201ENST00000365006 84 ntBASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 SNORD6-201ENST00000365444 73 ntBASIC3.88□□□□□ -1.79
CCM2Q9BSQ5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms