Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 COX6B1P3-201ENST00000312310 260 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 MIR375-201ENST00000362103 64 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 MIR181A1-201ENST00000385026 110 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LITAFQ99732 RPL31P52-201ENST00000407532 367 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 SNORA77-201ENST00000408716 125 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 Z93019.1-201ENST00000416450 973 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 C1DP2-201ENST00000418167 426 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 OR2AM1P-201ENST00000422137 422 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 USP9YP18-201ENST00000425912 695 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 RPL23AP74-201ENST00000437246 471 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC073614.1-201ENST00000438690 650 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 PA2G4P1-201ENST00000442248 1197 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MTND6P13-201ENST00000443510 523 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC239809.1-201ENST00000450470 217 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 BX322784.1-201ENST00000455793 1077 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC112204.1-201ENST00000502591 103 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 LSM3P4-201ENST00000502948 309 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 OR51K1P-201ENST00000510214 950 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 RNA5SP392-201ENST00000516905 112 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 RN7SKP99-201ENST00000517028 307 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 SNORA43.3-201ENST00000517240 103 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 NRON-201ENST00000517270 370 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MTCO2P4-201ENST00000517968 247 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC024405.1-201ENST00000532521 1042 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC079905.1-201ENST00000549280 475 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC124947.2-202ENST00000552735 133 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 RPL21P5-201ENST00000554662 472 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC092325.1-201ENST00000566449 554 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 UBE2FP2-201ENST00000566646 462 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 MTND6P33-201ENST00000571794 183 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MTCO3P24-201ENST00000572729 782 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC090312.1-201ENST00000580637 348 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.29□□□□□ -1.88
LITAFQ99732 VN1R79P-201ENST00000593540 513 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC087783.2-201ENST00000605070 562 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AP000860.1-201ENST00000605250 559 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC080013.4-201ENST00000607624 649 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC015813.4-201ENST00000610469 179 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC090970.3-201ENST00000612566 866 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MIR6721-201ENST00000617181 87 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 U6.42-201ENST00000618440 107 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 CR381653.2-201ENST00000624041 768 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC135068.12-201ENST00000637370 931 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC099654.13-201ENST00000639774 207 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LITAFQ99732 AL445437.1-201ENST00000623157 3087 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.29□□□□□ -1.88
LITAFQ99732 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 MTND5P28-201ENST00000438005 1594 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LITAFQ99732 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.29□□□□□ -1.88
LITAFQ99732 AC009229.4-201ENST00000623854 1947 ntBASIC3.29□□□□□ -1.88
LITAFQ99732 AP002001.2-201ENST00000529025 1469 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 MAPK10-320ENST00000641462 6696 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.28□□□□□ -1.88
LITAFQ99732 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 RNU6-343P-201ENST00000364709 104 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LITAFQ99732 RNU6-1226P-201ENST00000384317 107 ntBASIC3.28□□□□□ -1.88
LITAFQ99732 AL031679.1-201ENST00000400616 525 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms