Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HIGD1AP5-201ENST00000529959 259 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 MRPS21P9-201ENST00000571150 257 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC012603.1-201ENST00000606424 528 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL596275.2-208ENST00000641192 594 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL606537.1-201ENST00000607258 2011 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AL034546.1-201ENST00000623740 3693 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 AC132219.2-201ENST00000624416 2327 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PHOX2BQ99453 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PHOX2BQ99453 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.82□□□□□ -1.32
PHOX2BQ99453 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PHOX2BQ99453 RN7SKP107-201ENST00000364157 290 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 RNU6-946P-201ENST00000383878 107 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 SNORD51-201ENST00000384320 80 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 Y_RNA.473-201ENST00000384333 102 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 Y_RNA.526-201ENST00000384572 110 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 MIR575-201ENST00000385013 94 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 RPL21P109-201ENST00000422213 475 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 RPS15AP10-201ENST00000432472 382 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL590128.1-201ENST00000433407 286 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC073410.1-201ENST00000435125 589 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC011816.1-201ENST00000441346 546 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 SNX18P26-201ENST00000458433 740 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 SNORD127-201ENST00000458892 86 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC004453.1-201ENST00000487895 408 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 LSM3P4-201ENST00000502948 309 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC093852.1-201ENST00000503587 266 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 ATP5LP3-201ENST00000514223 304 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 RFPL4AP5-201ENST00000514977 504 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 RNU2-69P-201ENST00000516061 100 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 SNORA40.14-201ENST00000516543 86 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 Y_RNA.715-201ENST00000517082 110 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC139365.2-201ENST00000517972 253 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 IGLVIV-53-201ENST00000520107 367 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 IGLVV-66-201ENST00000523818 341 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AP003396.4-201ENST00000527574 265 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 DEFB108D-201ENST00000527787 222 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AP000889.1-201ENST00000530968 660 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 RPA2P3-201ENST00000533268 770 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 SULT1C2P2-201ENST00000562517 294 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC124068.1-201ENST00000563131 678 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC078899.3-201ENST00000599065 212 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AC020765.1-201ENST00000604296 328 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL513218.1-201ENST00000606527 391 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 SNORD58B-201ENST00000607313 66 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AL359547.2-201ENST00000615810 418 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 AP001784.1-201ENST00000624107 428 ntBASIC6.81□□□□□ -1.32
PHOX2BQ99453 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PHOX2BQ99453 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms