Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP000542.2-201ENST00000623199 6179 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC135352.1-201ENST00000506173 1418 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 SNORA73.1-201ENST00000363107 205 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 MT-TD-201ENST00000387419 68 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 SNORD65.1-201ENST00000390889 71 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RN7SKP56-201ENST00000410513 331 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL21P111-201ENST00000418453 477 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC006065.1-201ENST00000422539 802 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007742.1-201ENST00000425789 329 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104837.2-201ENST00000427236 424 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007559.1-201ENST00000428736 355 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 ELOCP26-201ENST00000436067 329 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 PA2G4P6-201ENST00000438325 1197 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AL450023.3-201ENST00000440592 271 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS4XP4-201ENST00000443195 763 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL7P31-201ENST00000450192 724 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RFC5P1-201ENST00000454419 874 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS20P24-201ENST00000457473 361 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092324.1-201ENST00000468671 324 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 ENPP7P11-201ENST00000505915 627 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.719-201ENST00000517156 106 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC100784.1-201ENST00000522790 310 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 OR5AQ1P-201ENST00000527596 927 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 FAM92A1P1-201ENST00000528023 890 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AP003072.1-201ENST00000531740 145 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 NIFKP8-201ENST00000560500 874 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR4795-201ENST00000584182 89 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 MTCO2P22-201ENST00000603246 681 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 BNIP3P11-201ENST00000603878 563 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AL020991.1-201ENST00000612314 373 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 MTCO1P23-201ENST00000415223 1526 ntBASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP1Q96SZ6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 SNORA63-201ENST00000363450 132 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 RN7SKP103-201ENST00000363848 320 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.311-201ENST00000365068 96 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 RNU6-248P-201ENST00000410720 107 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS20P15-201ENST00000412792 311 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL354751.2-201ENST00000415471 210 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL512649.1-201ENST00000428997 581 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 MTCYBP45-201ENST00000435243 565 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC097499.1-201ENST00000444277 208 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 COX6CP18-201ENST00000448769 222 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.704-201ENST00000516851 102 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 VN1R79P-201ENST00000593540 513 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC107214.2-201ENST00000608204 634 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 340.8 ms