Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
IFT140Q96RY7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
IFT140Q96RY7 ASNSP1-201ENST00000518311 1939 ntBASIC5.11□□□□□ -1.59
IFT140Q96RY7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
IFT140Q96RY7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
IFT140Q96RY7 SNORA67.4-201ENST00000384688 142 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC002524.1-201ENST00000411687 547 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC233280.2-201ENST00000603917 1070 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC004832.5-201ENST00000608677 401 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC244517.3-201ENST00000616254 1235 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
IFT140Q96RY7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
IFT140Q96RY7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
IFT140Q96RY7 AC009313.2-201ENST00000417893 1941 ntBASIC5.1□□□□□ -1.59
IFT140Q96RY7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
IFT140Q96RY7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
IFT140Q96RY7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 HMGB3P18-201ENST00000406327 590 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 AC003685.2-201ENST00000422795 395 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 ETF1P3-201ENST00000430422 1160 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
IFT140Q96RY7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 HNRNPKP5-201ENST00000515300 253 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 AC022882.1-201ENST00000532142 501 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 AC024153.1-201ENST00000603103 365 ntBASIC5.09□□□□□ -1.59
IFT140Q96RY7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.09□□□□□ -1.59
IFT140Q96RY7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.09□□□□□ -1.6
IFT140Q96RY7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
IFT140Q96RY7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT140Q96RY7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT140Q96RY7 AL356968.1-201ENST00000416622 474 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 AC073587.1-201ENST00000447093 876 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 RPS3P1-201ENST00000456781 192 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 RPL5P16-201ENST00000471467 790 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 HSPE1P6-201ENST00000479457 291 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 RN7SKP272-201ENST00000516988 232 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 AP000916.1-201ENST00000533869 835 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 RN7SL371P-201ENST00000578099 267 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 MIR486-1-201ENST00000612171 68 ntBASIC5.08□□□□□ -1.6
IFT140Q96RY7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
IFT140Q96RY7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
IFT140Q96RY7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
IFT140Q96RY7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.08□□□□□ -1.6
IFT140Q96RY7 MIR34A-201ENST00000385130 110 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 RNA5SP508-201ENST00000411327 119 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 NANOGP6-201ENST00000429190 847 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC021205.2-201ENST00000480069 347 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC104687.1-201ENST00000485829 412 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 ACTG1P13-201ENST00000486987 1043 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 FCF1P3-201ENST00000496394 590 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 AL035413.2-201ENST00000604801 525 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT140Q96RY7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT140Q96RY7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IFT140Q96RY7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 ELF2P3-201ENST00000445099 1506 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IFT140Q96RY7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 RNU6-851P-201ENST00000384565 107 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 MIR887-201ENST00000401258 79 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AL356057.1-202ENST00000402263 756 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 RPL7P8-201ENST00000411964 730 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 SKP1P1-201ENST00000438081 489 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AL513328.1-201ENST00000446460 224 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 Z99127.3-201ENST00000448158 395 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 RPL37P4-201ENST00000448908 268 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 PRDX3P4-201ENST00000470828 747 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
IFT140Q96RY7 OOSP1P2-201ENST00000579644 351 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 AC074276.2-201ENST00000619891 348 ntBASIC5.07□□□□□ -1.6
IFT140Q96RY7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms