Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC053481.3-201ENST00000577881 843 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC112230.1-201ENST00000604342 547 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC105429.2-201ENST00000610567 517 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC004943.3-201ENST00000624116 600 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AL732372.2-225ENST00000642124 456 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.4□□□□□ -1.86
COL21A1Q96P44 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
COL21A1Q96P44 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
COL21A1Q96P44 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 RNA5SP44-201ENST00000410446 133 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC010385.1-201ENST00000412374 256 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 RPL31P45-201ENST00000419532 356 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 OSTCP5-201ENST00000425293 453 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 ELOCP6-201ENST00000429066 328 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL445584.1-201ENST00000431451 330 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL035246.1-201ENST00000433554 1255 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL645931.1-201ENST00000439737 410 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 ELOCP12-201ENST00000458706 328 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 CYCSP20-201ENST00000473154 315 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AP000893.1-201ENST00000474462 794 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC087385.1-201ENST00000475062 312 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 RPL21P103-201ENST00000479921 488 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 RNA5SP309-201ENST00000516670 106 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 SCARNA13-201ENST00000516672 275 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 MTCO1P49-201ENST00000523429 802 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC025260.1-201ENST00000548858 430 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC023161.2-201ENST00000551218 780 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC006130.2-201ENST00000586202 326 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC083899.3-201ENST00000603413 594 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL21A1Q96P44 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 AC058791.1-201ENST00000608412 3198 ntBASIC3.4□□□□□ -1.87
COL21A1Q96P44 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL21A1Q96P44 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AL161912.2-201ENST00000565707 3007 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 RNA5SP387-201ENST00000364226 106 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 OR52E6-202ENST00000379946 954 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 NPM1P10-201ENST00000398310 865 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC105402.2-201ENST00000438503 358 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC010655.1-201ENST00000449336 292 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC096992.1-201ENST00000459808 709 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC010468.1-201ENST00000461022 817 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 ACTR3P3-201ENST00000480448 893 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL21A1Q96P44 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.39□□□□□ -1.87
COL21A1Q96P44 AP001180.3-201ENST00000582221 145 ntBASIC3.39□□□□□ -1.87
COL21A1Q96P44 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms