Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC092685.1-201ENST00000447960 1243 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC146507.1-201ENST00000468335 354 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC078785.3-201ENST00000476607 425 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC092451.1-201ENST00000480211 153 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RNU1-95P-201ENST00000516357 160 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RNU1-128P-201ENST00000516704 160 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AP004242.1-201ENST00000533701 349 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC040174.2-201ENST00000602701 465 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC245389.1-201ENST00000605141 529 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC003001.2-201ENST00000616294 831 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RNU6-156P-201ENST00000621869 107 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC006065.5-201ENST00000623427 349 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 FRG1DP-201ENST00000635586 771 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 SNORA5A-201ENST00000384111 134 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 RNU2-21P-201ENST00000410368 188 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 HMGB3P20-201ENST00000417997 600 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 GOT2P5-201ENST00000433995 546 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC022034.3-201ENST00000471393 478 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC104689.1-201ENST00000473356 768 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC108729.2-201ENST00000476543 840 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC025918.2-201ENST00000558683 763 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 MIR3158-1-201ENST00000583596 81 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AL450270.1-201ENST00000606160 391 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC012467.1-201ENST00000607740 256 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 MIR1264-201ENST00000616374 69 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC006133.1-201ENST00000617106 264 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 MIR6864-201ENST00000617935 70 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 AC119744.1-201ENST00000454746 1715 ntBASIC3.8□□□□□ -1.8
RPRD1AQ96P16 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.8□□□□□ -1.8
RPRD1AQ96P16 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 TNPO1P3-201ENST00000436471 2662 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC000367.1-201ENST00000452711 1766 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 RNU6-543P-201ENST00000362576 108 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 RNA5SP51-201ENST00000364750 119 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 RNU6-356P-201ENST00000384140 107 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 MIR200C-201ENST00000384980 68 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 SNORA11-201ENST00000408789 128 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 USP12PY-201ENST00000427677 1064 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 RPS3AP46-201ENST00000448352 682 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.79□□□□□ -1.8
RPRD1AQ96P16 AC005921.1-201ENST00000510589 286 ntBASIC3.79□□□□□ -1.8
RPRD1AQ96P16 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms