Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ISCUP1-201ENST00000454451 448 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 snoU13.7-201ENST00000459220 104 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 APOOP2-201ENST00000461561 539 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 BZW1P2-201ENST00000473537 826 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AP000893.1-201ENST00000474462 794 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RPL7P38-201ENST00000488396 739 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RPS4XP18-201ENST00000495480 763 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ATP1B1P1-201ENST00000509767 915 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 OR51K1P-201ENST00000510214 950 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 NPM1P6-201ENST00000521088 871 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC090502.2-201ENST00000549267 280 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 MIR4277-201ENST00000578298 84 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC090616.2-202ENST00000584248 222 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC121247.2-201ENST00000604776 136 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC112220.3-201ENST00000605502 502 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC079248.2-201ENST00000623779 326 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AL049536.1-201ENST00000625043 744 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 U3.53-201ENST00000628922 216 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC007671.2-201ENST00000637344 619 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MTND5P28-201ENST00000438005 1594 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC021146.4-201ENST00000309229 279 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 OR52B1P-201ENST00000316506 909 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 SNORD113.2-201ENST00000364166 89 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 SNORA71.2-201ENST00000364941 134 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MIR649-201ENST00000384843 97 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 RNA5SP372-201ENST00000390836 115 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 RPL7AP25-201ENST00000423357 805 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 SDCBPP2-201ENST00000424643 885 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 RPL21P91-201ENST00000429231 479 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 SLC31A1P1-201ENST00000451221 567 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC147055.4-201ENST00000504399 745 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 RNY4P37-201ENST00000516225 96 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC022790.1-201ENST00000522872 204 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AP000790.1-201ENST00000528891 737 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 LSM6P2-201ENST00000552208 177 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 SULT1C2P1-202ENST00000562418 459 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MTCYBP28-201ENST00000566728 1132 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AP001521.1-201ENST00000609150 300 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 MIR6798-201ENST00000612887 67 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AC092650.2-201ENST00000619984 902 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 AL391684.1-202ENST00000641293 1636 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 OR5BR1P-201ENST00000524992 1330 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 KARSP3-201ENST00000571212 1504 ntBASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHMP4CQ96CF2 ZNF137P-201ENST00000456718 1920 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 DHX40P1-201ENST00000588725 1412 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RPS3AP9-201ENST00000417027 792 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC004448.2-201ENST00000422360 586 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RPL30P3-201ENST00000424262 333 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms