Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Y_RNA.210-201ENST00000364161 110 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 SNORA20.1-201ENST00000364790 130 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
HLA-CQ95604 RNU6-1226P-201ENST00000384317 107 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 MIR1203-201ENST00000408812 85 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC244452.1-201ENST00000413798 141 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC114491.1-201ENST00000416095 246 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RPS15AP10-201ENST00000432472 382 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 CRYGGP-201ENST00000443337 145 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC011742.2-201ENST00000443818 352 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 NOP56P2-201ENST00000447491 769 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 RNU7-167P-201ENST00000459160 62 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RN7SL834P-201ENST00000461450 286 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 GLRXP3-201ENST00000470810 321 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RPS27AP1-201ENST00000475545 471 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RPS14P8-201ENST00000478778 369 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 MTND6P8-201ENST00000503471 522 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 SCARNA18.1-201ENST00000516330 83 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AP001858.2-201ENST00000536213 601 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC124068.1-201ENST00000563131 678 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 SUB1P3-201ENST00000564581 315 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC005341.1-201ENST00000571086 708 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC110743.1-201ENST00000584870 478 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 AL513218.1-201ENST00000606527 391 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 SNORD58B-201ENST00000607313 66 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 AC009570.1-201ENST00000609599 745 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 MIR6748-201ENST00000610433 71 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 GNL2P1-201ENST00000451274 2190 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-CQ95604 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
HLA-CQ95604 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-CQ95604 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-CQ95604 SNORA21-201ENST00000362423 132 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 SNORD62.1-201ENST00000362541 86 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RN7SKP162-201ENST00000363605 345 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 Y_RNA.785-201ENST00000384290 109 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 Y_RNA.562-201ENST00000384695 113 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 DBIP1-201ENST00000401435 260 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RPS3AP2-201ENST00000407190 754 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RNU4-34P-201ENST00000410431 124 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RNU6-55P-201ENST00000411092 107 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RNU2-22P-201ENST00000411266 212 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RPL35AP22-201ENST00000436855 335 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AL121871.1-201ENST00000443413 436 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC005077.1-201ENST00000449226 375 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC002553.3-201ENST00000453002 341 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AL445687.2-201ENST00000458156 728 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RNU6-1218P-201ENST00000458990 108 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC022215.1-201ENST00000481770 362 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC231760.1-201ENST00000498002 260 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC010350.1-201ENST00000504908 231 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC108078.2-201ENST00000510750 236 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.68□□□□□ -1.34
HLA-CQ95604 Y_RNA.680-201ENST00000516441 93 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 RNU6-182P-201ENST00000516970 105 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 IGHV3-76-201ENST00000522465 295 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AP003385.6-201ENST00000531603 374 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AC091516.1-201ENST00000549191 703 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.68□□□□□ -1.34
HLA-CQ95604 MIR4504-201ENST00000577413 92 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms