Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 BTF3P9-201ENST00000418784 283 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 SKP1P1-201ENST00000438081 489 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC087241.4-201ENST00000612441 480 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 RN7SKP44-201ENST00000363602 316 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AL353692.2-201ENST00000407054 335 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 CEP170P1-201ENST00000502249 4587 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AL136097.1-201ENST00000456945 913 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC084357.1-201ENST00000473404 255 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 VN1R90P-201ENST00000595717 726 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AL139286.1-201ENST00000604465 483 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AL450489.1-201ENST00000612071 468 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 SNORD6-201ENST00000365444 73 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 RHEBP3-201ENST00000411920 351 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 RPL7P36-201ENST00000444633 681 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 EIF1P6-201ENST00000600054 334 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 MRPS35P3-201ENST00000603189 709 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 RPS4XP5-202ENST00000449995 1334 ntBASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALMS1Q8TCU4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC073325.2-201ENST00000339545 159 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RN7SKP222-201ENST00000410651 315 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC069540.1-201ENST00000446320 988 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RPL7P47-201ENST00000497299 556 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC110794.1-201ENST00000505816 425 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 BTF3L4P4-201ENST00000506381 449 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC008413.1-201ENST00000511864 177 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AL162713.1-201ENST00000604480 262 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 BRDTP1-201ENST00000605735 677 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 MTCO3P16-201ENST00000454456 754 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 SNORD109B-201ENST00000458961 67 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 SNORD109A-201ENST00000459128 67 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AL035404.1-201ENST00000497982 568 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 HMGB1P3-201ENST00000502802 616 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RMST_8.1-201ENST00000610287 165 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC008121.2-201ENST00000614647 523 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 AC103858.2-201ENST00000621471 543 ntBASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ALMS1Q8TCU4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC234781.4-201ENST00000419384 244 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AC012065.2-201ENST00000421295 375 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 AL357520.1-201ENST00000441557 453 ntBASIC2.17□□□□□ -2.06
ALMS1Q8TCU4 RPL37P4-201ENST00000448908 268 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms