Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP335-201ENST00000363817 110 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 MIR1302-3-201ENST00000408128 138 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-847P-201ENST00000411115 108 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 CACYBPP1-201ENST00000438592 684 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 MTND2P29-201ENST00000438595 412 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 PSMC1P13-201ENST00000458195 985 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC017015.1-201ENST00000477387 286 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 HMGB3P15-201ENST00000507326 574 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RN7SKP99-201ENST00000517028 307 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1137P-201ENST00000517073 99 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC138832.1-201ENST00000522871 556 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 HAUS8P1-201ENST00000549005 542 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC063950.1-201ENST00000552036 308 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC009117.1-201ENST00000563948 554 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 MIR7155-201ENST00000615925 56 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC118658.2-201ENST00000618697 459 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 MTND4LP32-201ENST00000636111 270 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC099654.6-201ENST00000636487 512 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 DBF4P1-201ENST00000412976 1892 ntBASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHKBP1Q8TBC3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 CDY11P-201ENST00000447168 1651 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP453-201ENST00000362503 119 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 SNORD1C-201ENST00000363315 78 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RN7SKP44-201ENST00000363602 316 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RN7SKP6-201ENST00000364795 319 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1297P-201ENST00000384415 104 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNA5SP91-201ENST00000390902 119 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AL592114.1-201ENST00000403842 483 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 MIR548F4-201ENST00000408515 105 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 OR10T1P-201ENST00000424327 947 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 BX276092.6-201ENST00000430476 250 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC099670.2-201ENST00000435130 321 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AL138787.1-202ENST00000437804 898 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC239798.3-201ENST00000454459 408 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RPL12P39-201ENST00000455456 496 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 BX276092.8-201ENST00000455722 250 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 HMGN2P26-201ENST00000463169 339 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC104687.1-201ENST00000485829 412 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RPS21P4-201ENST00000487122 248 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC072052.1-201ENST00000496556 306 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 GAPDHP56-201ENST00000506031 988 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-559P-201ENST00000516151 98 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-150P-201ENST00000516237 95 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1003P-201ENST00000517099 105 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC022634.1-201ENST00000520765 532 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC078899.5-201ENST00000612475 178 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms