Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 EIF2AP4-201ENST00000424793 1781 ntBASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
SIMC1Q8NDZ2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 ZNF33CP-201ENST00000432492 2030 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 FGF7P2-201ENST00000332473 296 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RNU6-582P-201ENST00000362989 107 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 Y_RNA.311-201ENST00000365068 96 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 Y_RNA.408-201ENST00000383987 102 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RNU6-1293P-201ENST00000384077 107 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MIR217-201ENST00000384817 110 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MIR765-201ENST00000390226 114 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC013442.1-201ENST00000397347 228 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AL589647.1-201ENST00000402485 466 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 PIGPP2-201ENST00000411569 458 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 CYCSP10-201ENST00000417973 294 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 Z93242.1-201ENST00000427102 353 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 BX323845.1-201ENST00000432417 179 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RPS11P7-201ENST00000442125 465 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 DNAJC19P1-201ENST00000455312 319 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 NF1P3-201ENST00000457709 450 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MTND1P16-201ENST00000465177 898 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 TMED11P-201ENST00000479478 690 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 CEACAMP10-202ENST00000495431 496 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 KLRA1P-201ENST00000503499 986 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC074344.1-201ENST00000512823 224 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC114781.4-201ENST00000513707 639 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MIR4504-201ENST00000577413 92 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 IMMP1LP1-201ENST00000605170 488 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC112220.3-201ENST00000605502 502 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AL445222.1-201ENST00000607259 628 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC007014.2-201ENST00000615581 479 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RNU6-156P-201ENST00000621869 107 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AC026634.1-201ENST00000634369 198 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LINC01739-205ENST00000641890 573 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 OR5H6-203ENST00000642105 978 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIMC1Q8NDZ2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 AC109315.1-201ENST00000584143 1347 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 RPL23P2-201ENST00000320371 421 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 RNU6-492P-201ENST00000363035 104 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 RNU1-85P-201ENST00000364127 164 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 SNORA4.1-201ENST00000364263 144 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 RNU6-621P-201ENST00000364752 109 ntBASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIMC1Q8NDZ2 SNORD116-23-201ENST00000384645 92 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms