Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC124293.1-201ENST00000530034 493 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 RFPL1S-203ENST00000539579 330 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 SNORA62.6-201ENST00000606322 83 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC013468.1-201ENST00000608680 598 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
C9orf40Q8IXQ3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC024560.2-201ENST00000507981 1497 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 SNORA51.12-201ENST00000384448 134 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 SOD2P1-201ENST00000396543 562 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL138785.1-201ENST00000425821 331 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 RPS6P12-201ENST00000432491 726 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 HSFY7P-201ENST00000432672 318 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 HSFY8P-201ENST00000437934 318 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 ARF4P4-201ENST00000439608 520 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 SETD6P1-201ENST00000444575 317 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 MTND1P33-201ENST00000446251 917 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL050341.1-201ENST00000447743 313 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL500522.2-201ENST00000448562 343 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 IFNWP4-201ENST00000453148 294 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 HSFY5P-201ENST00000453726 309 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 UBDP1-202ENST00000457888 382 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL133162.1-201ENST00000463228 453 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC104689.1-201ENST00000473356 768 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 HMGB1P38-201ENST00000490557 577 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC092045.1-201ENST00000495716 1231 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 SNORD116-26-201ENST00000516006 96 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 RNU1-45P-201ENST00000517191 141 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC007991.1-201ENST00000522680 631 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC090819.1-201ENST00000523800 1111 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC019227.1-201ENST00000526902 510 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC006518.2-201ENST00000542513 940 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 CBX3P5-201ENST00000552017 521 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 CYP2C60P-201ENST00000566088 139 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL390816.3-201ENST00000604527 1066 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AL139022.2-201ENST00000606934 443 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC112503.1-201ENST00000608436 391 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AF129408.1-201ENST00000608767 431 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC243756.2-201ENST00000618406 463 ntBASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf40Q8IXQ3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL512646.1-201ENST00000269395 1077 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 HLFP1-201ENST00000402375 499 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms