Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC107982.1-201ENST00000507171 1300 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RNA5SP130-201ENST00000364431 114 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RN7SKP33-201ENST00000410942 340 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 CYCSP10-201ENST00000417973 294 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RPS15AP40-201ENST00000419621 391 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC010099.3-201ENST00000423896 409 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RPL36P19-201ENST00000430744 301 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RPS29P7-201ENST00000439662 171 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RPL23AP76-201ENST00000441860 458 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RPL7P31-201ENST00000450192 724 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AL133477.1-201ENST00000457472 514 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC018797.3-201ENST00000513388 1241 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 SNORA3.4-201ENST00000515969 96 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RNA5SP497-201ENST00000516081 97 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RNU5A-4P-201ENST00000516588 111 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 SNORA48.10-201ENST00000516965 160 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC010198.2-201ENST00000550612 259 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AL161713.1-201ENST00000555538 145 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC079171.1-201ENST00000568788 914 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RN7SL703P-201ENST00000578485 302 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC115621.1-201ENST00000604653 858 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 RNU4-89P-201ENST00000607443 133 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AL451074.6-201ENST00000608512 729 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC092954.1-201ENST00000609121 445 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC107075.1-201ENST00000613695 314 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC068722.2-201ENST00000618734 544 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC098679.5-201ENST00000624394 571 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 Y_RNA.25-201ENST00000362528 102 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 MIR649-201ENST00000384843 97 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC069218.2-201ENST00000411665 344 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 MFSD13B-201ENST00000420133 1290 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 RPL7P44-201ENST00000424827 742 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC005345.1-201ENST00000431868 217 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 COX7BP2-201ENST00000437976 242 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC013828.1-201ENST00000481845 158 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC005726.1-201ENST00000494679 427 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 WBP1LP4-201ENST00000505043 344 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC116353.3-201ENST00000511215 249 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC008837.2-201ENST00000513076 418 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 RNU6-1261P-201ENST00000517194 104 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC245036.5-201ENST00000596330 847 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 HSPE1P14-201ENST00000605812 302 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC107952.2-201ENST00000606048 486 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 TUSC7.1-201ENST00000610969 165 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC079395.3-201ENST00000615161 484 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 AC139713.2-215ENST00000641428 5037 ntBASIC4.73□□□□□ -1.65
HERC6Q8IVU3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms