Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HSPA8P19-201ENST00000505359 1517 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 SNORA70.2-201ENST00000364506 135 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 HMGB1P10-201ENST00000395823 563 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 RPL7P2-201ENST00000427639 268 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC125238.1-201ENST00000448842 249 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 UBDP1-202ENST00000457888 382 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AP000873.1-201ENST00000463987 400 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 RN7SL385P-201ENST00000468873 276 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC022034.3-201ENST00000471393 478 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC093853.1-201ENST00000515689 483 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC139103.1-201ENST00000534696 1030 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC012531.5-201ENST00000611375 151 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL118556.2-201ENST00000614375 824 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AP006248.3-201ENST00000623580 594 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 AC004943.3-201ENST00000624116 600 ntBASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CCDC50Q8IVM0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 METTL21EP-201ENST00000298105 713 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 RNU6-796P-201ENST00000391086 107 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 RPL32P23-201ENST00000397237 405 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 RPL7P60-201ENST00000397636 735 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 OSTCP5-201ENST00000425293 453 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 PTP4A1P3-201ENST00000433661 420 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 SNORD108-201ENST00000459332 71 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC096992.1-201ENST00000459808 709 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 RPL37P6-202ENST00000464216 403 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC092185.1-201ENST00000491371 97 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC110792.2-201ENST00000510278 224 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 RN7SL703P-201ENST00000578485 302 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 AL732618.1-201ENST00000623251 301 ntBASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC50Q8IVM0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 DCAF13P3-201ENST00000561147 1334 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 OR4A15-201ENST00000314706 1035 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 RNU6-543P-201ENST00000362576 108 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 AC004975.1-201ENST00000428733 208 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 BX679664.1-201ENST00000434429 253 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC50Q8IVM0 AC090071.1-201ENST00000507713 644 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms