Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC078918.1-201ENST00000498515 228 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC024560.2-201ENST00000507981 1497 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 PTGES3P3-201ENST00000511479 482 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 C1DP5-201ENST00000525775 383 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 PDCL2P2-201ENST00000533651 189 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AP004242.1-201ENST00000533701 349 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 OR2BH1P-201ENST00000608850 864 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC104446.1-201ENST00000613728 1321 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-213P-201ENST00000384051 104 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-1293P-201ENST00000384077 107 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 MIR141-201ENST00000384975 95 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 U3.39-201ENST00000408569 239 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC073508.1-201ENST00000428866 656 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RPS27AP12-201ENST00000429552 465 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 ELOCP3-201ENST00000439303 348 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RNFT1P2-201ENST00000443064 757 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 NPM1P49-201ENST00000448027 714 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RPL12P26-201ENST00000452430 487 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 MTND2P30-201ENST00000456663 382 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC010618.1-201ENST00000469924 477 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC104689.1-201ENST00000473356 768 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 TMED11P-201ENST00000479478 690 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC026979.1-201ENST00000492525 396 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC010468.3-201ENST00000508225 458 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC008565.1-201ENST00000509046 885 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC005921.1-201ENST00000510589 286 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SCARNA14-201ENST00000516903 136 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SNORA76.2-201ENST00000517095 137 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RNU4-60P-201ENST00000517239 135 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC083923.1-201ENST00000523708 376 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 OR5D17P-201ENST00000531492 978 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC026333.2-201ENST00000542164 106 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AL389895.1-201ENST00000554127 252 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC025884.1-201ENST00000556034 378 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC012254.4-201ENST00000588843 273 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC005962.2-201ENST00000611427 652 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC107308.1-201ENST00000615897 301 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC006338.2-201ENST00000616864 791 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-156P-201ENST00000621869 107 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 MIR6830-201ENST00000636015 70 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 MIR492-201ENST00000638676 116 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUDCD3Q8IVD9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 MTCO1P18-201ENST00000455518 1419 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AL022722.2-201ENST00000402519 180 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AL049693.1-201ENST00000402760 611 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 ATF1P1-201ENST00000406040 927 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 SDCBPP2-201ENST00000424643 885 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms