Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC104297.1-201ENST00000393779 870 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 HLFP1-201ENST00000402375 499 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 HSPE1P8-201ENST00000406997 288 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 SMC4P1-201ENST00000414479 527 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 DNAJC19P3-201ENST00000594491 331 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC098826.3-201ENST00000603823 466 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC006840.1-201ENST00000623069 542 ntBASIC2.45□□□□□ -2.02
VPS13CQ709C8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS13CQ709C8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 GABRG2-229ENST00000641017 3628 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 GNG5P5-201ENST00000420444 220 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 ELOCP18-201ENST00000434209 337 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 ELOCP23-201ENST00000452014 332 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 AP000859.1-201ENST00000525536 307 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC009163.5-201ENST00000575421 637 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC015917.1-201ENST00000579654 510 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 AL359535.1-201ENST00000612100 1087 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 MFSD8-233ENST00000641482 4860 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 RN7SKP199-201ENST00000410325 305 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC063976.3-201ENST00000426849 329 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 RPS4XP22-201ENST00000480755 780 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13CQ709C8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AADACP1-206ENST00000561502 1193 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 GMCL1P2-201ENST00000605230 823 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 AL158062.1-201ENST00000619632 745 ntBASIC2.44□□□□□ -2.02
VPS13CQ709C8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13CQ709C8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC006484.1-201ENST00000435086 1884 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 MIR448-201ENST00000362131 111 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13CQ709C8 ATF1P1-201ENST00000406040 927 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC092447.2-201ENST00000435487 669 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 ATP5F1P7-201ENST00000567330 760 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 OR5BR1P-201ENST00000524992 1330 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13CQ709C8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13CQ709C8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13CQ709C8 SNRPGP5-201ENST00000456003 220 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 RPL31P13-201ENST00000484151 370 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC107934.2-201ENST00000518653 310 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 SERPINE4P-201ENST00000554978 281 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC073476.4-201ENST00000628409 72 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 OR1S2-201ENST00000302592 978 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 WASF1P1-201ENST00000447560 1131 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AL356321.1-201ENST00000621360 228 ntBASIC2.43□□□□□ -2.02
VPS13CQ709C8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13CQ709C8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 RPS26P47-201ENST00000427219 348 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 FAM103A2P-201ENST00000444122 354 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 RPS26P3-201ENST00000470205 348 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms