Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC090337.1-201ENST00000579651 2074 ntBASIC3.39□□□□□ -1.87
REEP3Q6NUK4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 SEC63P2-201ENST00000503863 1939 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL049693.1-201ENST00000402760 611 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL136116.1-201ENST00000403591 381 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 OR4C10P-201ENST00000434991 931 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 RPL23AP15-201ENST00000450202 459 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC008280.2-201ENST00000455473 307 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL049830.2-201ENST00000480072 201 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 RNU2-27P-201ENST00000516185 142 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC040174.2-201ENST00000602701 465 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC006077.1-201ENST00000604746 343 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL034351.1-201ENST00000605288 668 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC048347.1-201ENST00000624621 427 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 AC017104.5-201ENST00000637647 639 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
REEP3Q6NUK4 MTND4P8-201ENST00000514997 1362 ntBASIC3.38□□□□□ -1.87
REEP3Q6NUK4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC016716.1-201ENST00000265882 708 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 RNA5SP283-201ENST00000365604 119 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC073310.1-201ENST00000423226 1033 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 UBE2V1P1-201ENST00000430836 445 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 PTP4A1P3-201ENST00000433661 420 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 UBE2V1P5-201ENST00000440070 405 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC004865.1-201ENST00000442276 1003 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 TPRKBP1-201ENST00000456243 481 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL136097.1-201ENST00000456945 913 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 PCBP2P3-201ENST00000509726 843 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC016065.2-201ENST00000514530 444 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 MTCO1P35-201ENST00000515270 228 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC026616.1-201ENST00000523157 525 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL139174.1-201ENST00000531489 886 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 MTND5P21-201ENST00000531961 522 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AGGF1P6-201ENST00000569213 976 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 BNIP3P38-201ENST00000601117 544 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AF230666.2-201ENST00000602328 725 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 YWHAQP7-201ENST00000603536 658 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL450270.1-201ENST00000606160 391 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 RNU1-30P-201ENST00000606575 163 ntBASIC3.37□□□□□ -1.87
REEP3Q6NUK4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
REEP3Q6NUK4 AC007656.2-201ENST00000624902 4547 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms