Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 UBTFL6-201ENST00000477929 1024 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPL7P51-201ENST00000490532 749 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC022447.3-201ENST00000506865 495 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 OR51K1P-201ENST00000510214 950 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC010625.1-201ENST00000511296 403 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC060788.1-201ENST00000521318 469 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC073091.2-201ENST00000603205 907 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC008782.1-201ENST00000603386 430 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC005084.1-201ENST00000605160 304 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC128687.1-201ENST00000605304 619 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RN7SKP299-201ENST00000606679 301 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC109309.2-201ENST00000612597 332 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 RPSAP73-201ENST00000614820 330 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC092140.2-201ENST00000618027 521 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 CASC19-264ENST00000641912 1184 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 NMD3P1-201ENST00000439704 1488 ntBASIC4.72□□□□□ -1.65
RNF220Q5VTB9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNF220Q5VTB9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF220Q5VTB9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF220Q5VTB9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL121657.1-201ENST00000327215 531 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 SNORA2.3-201ENST00000383920 135 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 LAP3P1-201ENST00000403648 294 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 COX6CP17-201ENST00000421389 185 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 RPL7L1P9-201ENST00000431298 745 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC069285.2-201ENST00000440210 275 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 COX6CP12-201ENST00000446748 202 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 SETP20-201ENST00000457046 852 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AP001992.1-205ENST00000462248 379 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 BX510359.5-201ENST00000515651 304 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC093853.1-201ENST00000515689 483 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 RPL12P22-201ENST00000519073 490 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 PDCD5P1-201ENST00000543528 309 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 NDUFB4P11-201ENST00000560510 395 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC064872.1-201ENST00000604823 1072 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL390208.1-201ENST00000605885 644 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 BRAFP1-201ENST00000445336 2703 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF220Q5VTB9 OR11H5P-202ENST00000641612 1325 ntBASIC4.71□□□□□ -1.66
RNF220Q5VTB9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF220Q5VTB9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms