Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC009302.1-201ENST00000417147 390 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC008280.1-201ENST00000418851 412 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC019178.2-201ENST00000423595 505 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC239367.2-201ENST00000447309 705 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC010618.1-201ENST00000469924 477 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 RPL30P6-201ENST00000475925 342 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 RNU2-30P-201ENST00000516209 141 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC027309.2-201ENST00000520566 192 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC010424.2-201ENST00000607594 443 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AL592148.3-201ENST00000608771 2646 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 AC027228.2-201ENST00000567141 2154 ntBASIC4.97□□□□□ -1.61
SLC44A4Q53GD3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 TLK1P1-201ENST00000456760 2440 ntBASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 CR381670.1-201ENST00000624291 1693 ntBASIC4.96□□□□□ -1.61
SLC44A4Q53GD3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 RNU6-251P-201ENST00000363235 104 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 SNORA48.4-201ENST00000391089 134 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 DSTNP4-201ENST00000399472 474 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL357515.1-201ENST00000402967 542 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MIR1284-201ENST00000408337 120 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC022028.1-201ENST00000412054 408 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC007738.1-201ENST00000413892 348 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 RPEP3-201ENST00000425462 676 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL162591.2-201ENST00000449634 317 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC239809.1-201ENST00000450470 217 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC013828.1-201ENST00000481845 158 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC092045.1-201ENST00000495716 1231 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MTCYBP17-201ENST00000503579 789 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC112198.1-201ENST00000505369 1220 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MTND1P5-201ENST00000517906 940 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AP000790.1-201ENST00000528891 737 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 KPNA2P3-201ENST00000584190 848 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 SNORD39.3-201ENST00000584451 71 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 NF1P5-201ENST00000588287 448 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL021997.1-201ENST00000605757 193 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC073114.1-201ENST00000612027 490 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 MIR6716-201ENST00000613413 80 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AC015914.2-201ENST00000618167 288 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 FP325313.1-201ENST00000638228 703 ntBASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A4Q53GD3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 RNA5SP388-201ENST00000362584 119 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 RNA5SP397-201ENST00000391323 118 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 RPL31P52-201ENST00000407532 367 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 RNU6-920P-201ENST00000410926 92 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms