Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 Y_RNA.263-201ENST00000364659 114 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 SUGT1P1-201ENST00000379514 476 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
FOXF2Q12947 Y_RNA.402-201ENST00000383972 102 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 RPL12P9-201ENST00000412942 488 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 RPL21P111-201ENST00000418453 477 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL389915.1-201ENST00000422463 466 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL513174.1-201ENST00000423182 629 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 COX6CP13-201ENST00000428703 226 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXF2Q12947 YWHAQP9-201ENST00000445891 512 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 RBM43P1-201ENST00000476891 1081 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 HMGB1P28-201ENST00000507778 552 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXF2Q12947 Y_RNA.701-201ENST00000516812 110 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AP002748.2-201ENST00000528671 348 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 OR4A45P-201ENST00000529954 901 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC027369.5-201ENST00000533838 755 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL133457.1-201ENST00000564251 987 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL391840.1-201ENST00000571144 367 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 MIR3913-1-201ENST00000577744 102 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 MIR4330-201ENST00000579077 105 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 MIR3667-201ENST00000581025 74 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 MIR4270-201ENST00000581799 70 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC008752.3-201ENST00000588113 712 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC020910.3-201ENST00000603701 874 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AL161616.1-201ENST00000611867 286 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AL592295.2-201ENST00000612578 206 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC027807.2-201ENST00000616099 408 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC023509.5-201ENST00000617434 807 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 AC120349.2-201ENST00000625002 298 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
FOXF2Q12947 CDR1-202ENST00000625883 1485 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
FOXF2Q12947 AC107021.2-201ENST00000567714 2095 ntBASIC4.4□□□□□ -1.71
FOXF2Q12947 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
FOXF2Q12947 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
FOXF2Q12947 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
FOXF2Q12947 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
FOXF2Q12947 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXF2Q12947 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
FOXF2Q12947 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXF2Q12947 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXF2Q12947 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXF2Q12947 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 Y_RNA.296-201ENST00000364930 108 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXF2Q12947 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXF2Q12947 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXF2Q12947 Y_RNA.573-201ENST00000384763 105 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 RNA5SP113-201ENST00000410486 84 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXF2Q12947 USP9YP13-201ENST00000417797 480 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AF228730.4-201ENST00000421457 183 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 FABP7P1-201ENST00000424004 391 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AL512649.1-201ENST00000428997 581 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 HMGB3P10-201ENST00000434734 572 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AL831737.1-201ENST00000441288 271 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AC093019.1-201ENST00000443135 252 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXF2Q12947 AC007677.1-201ENST00000445757 515 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 MTND4P19-201ENST00000446659 478 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AC004980.3-201ENST00000447046 365 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 MTND1P18-201ENST00000448191 573 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXF2Q12947 AL033528.1-201ENST00000453780 140 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXF2Q12947 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 LARP1BP2-201ENST00000486594 519 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXF2Q12947 HMGN1P12-201ENST00000499125 195 ntBASIC4.39□□□□□ -1.71
FOXF2Q12947 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXF2Q12947 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXF2Q12947 LRRC34P2-201ENST00000514850 553 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms