Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC009948.4-201ENST00000604692 675 ntBASIC4.22□□□□□ -1.73
COL16A1Q07092 AC100814.1-201ENST00000606963 623 ntBASIC4.22□□□□□ -1.73
COL16A1Q07092 AL158211.2-201ENST00000607282 395 ntBASIC4.22□□□□□ -1.73
COL16A1Q07092 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.22□□□□□ -1.73
COL16A1Q07092 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.22□□□□□ -1.73
COL16A1Q07092 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL16A1Q07092 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.22□□□□□ -1.73
COL16A1Q07092 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.22□□□□□ -1.73
COL16A1Q07092 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.21□□□□□ -1.73
COL16A1Q07092 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
COL16A1Q07092 MIR34A-201ENST00000385130 110 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 RNA5SP508-201ENST00000411327 119 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.21□□□□□ -1.73
COL16A1Q07092 RPS6P14-201ENST00000425165 719 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 ELOCP18-201ENST00000434209 337 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 SDR42E1P3-201ENST00000438345 502 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.21□□□□□ -1.73
COL16A1Q07092 HMGB3P22-202ENST00000451823 572 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 RPS3P1-201ENST00000456781 192 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 HSPE1P6-201ENST00000479457 291 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
COL16A1Q07092 AC084033.1-201ENST00000550830 633 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.21□□□□□ -1.73
COL16A1Q07092 ATP5F1P7-201ENST00000567330 760 ntBASIC4.21□□□□□ -1.73
COL16A1Q07092 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.21□□□□□ -1.73
COL16A1Q07092 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL16A1Q07092 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 RNU6-167P-201ENST00000384292 106 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 NPM1P10-201ENST00000398310 865 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.21□□□□□ -1.74
COL16A1Q07092 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.21□□□□□ -1.74
COL16A1Q07092 AL357552.1-201ENST00000445254 415 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 AC069540.1-201ENST00000446320 988 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.21□□□□□ -1.74
COL16A1Q07092 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.21□□□□□ -1.74
COL16A1Q07092 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.21□□□□□ -1.74
COL16A1Q07092 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.21□□□□□ -1.74
COL16A1Q07092 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL16A1Q07092 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.21□□□□□ -1.74
COL16A1Q07092 AC008676.3-201ENST00000521237 435 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.21□□□□□ -1.74
COL16A1Q07092 AC098826.3-201ENST00000603823 466 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 OR7M1P-201ENST00000608946 533 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.21□□□□□ -1.74
COL16A1Q07092 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.21□□□□□ -1.74
COL16A1Q07092 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.2□□□□□ -1.74
COL16A1Q07092 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL16A1Q07092 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.2□□□□□ -1.74
COL16A1Q07092 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL16A1Q07092 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL16A1Q07092 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AC017071.1-201ENST00000564407 2204 ntBASIC4.2□□□□□ -1.74
COL16A1Q07092 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.2□□□□□ -1.74
COL16A1Q07092 RPS4XP22-201ENST00000480755 780 ntBASIC4.2□□□□□ -1.74
COL16A1Q07092 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AP003168.1-201ENST00000530091 307 ntBASIC4.2□□□□□ -1.74
COL16A1Q07092 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.2□□□□□ -1.74
COL16A1Q07092 SNRPGP1-201ENST00000553864 222 ntBASIC4.2□□□□□ -1.74
COL16A1Q07092 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AC008638.3-201ENST00000603341 463 ntBASIC4.2□□□□□ -1.74
COL16A1Q07092 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.2□□□□□ -1.74
COL16A1Q07092 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.2□□□□□ -1.74
COL16A1Q07092 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.2□□□□□ -1.74
COL16A1Q07092 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL16A1Q07092 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL16A1Q07092 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL16A1Q07092 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL16A1Q07092 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.19□□□□□ -1.74
COL16A1Q07092 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.19□□□□□ -1.74
COL16A1Q07092 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL16A1Q07092 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL16A1Q07092 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL16A1Q07092 AC126124.2-201ENST00000413542 321 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 JKAMPP1-201ENST00000413804 919 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 AC019070.1-201ENST00000415008 1024 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.19□□□□□ -1.74
COL16A1Q07092 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.19□□□□□ -1.74
COL16A1Q07092 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.19□□□□□ -1.74
COL16A1Q07092 OR52A4P-203ENST00000498233 1014 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.19□□□□□ -1.74
COL16A1Q07092 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.19□□□□□ -1.74
COL16A1Q07092 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.19□□□□□ -1.74
COL16A1Q07092 AC008549.1-201ENST00000512900 643 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.19□□□□□ -1.74
COL16A1Q07092 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
COL16A1Q07092 EEF1A1P37-201ENST00000522748 715 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 ATP5F1P5-201ENST00000526403 760 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.19□□□□□ -1.74
COL16A1Q07092 AL161912.3-201ENST00000605404 628 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 AC144521.1-201ENST00000607148 956 ntBASIC4.19□□□□□ -1.74
COL16A1Q07092 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL16A1Q07092 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL16A1Q07092 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms