Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
UBA52P62987 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.96□□□□□ -1.94
UBA52P62987 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
UBA52P62987 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.96□□□□□ -1.94
UBA52P62987 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBA52P62987 AL365440.1-201ENST00000436135 2167 ntBASIC2.95□□□□□ -1.94
UBA52P62987 AF127577.6-201ENST00000623352 2191 ntBASIC2.95□□□□□ -1.94
UBA52P62987 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
UBA52P62987 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.95□□□□□ -1.94
UBA52P62987 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.95□□□□□ -1.94
UBA52P62987 SNORD9-201ENST00000362566 104 ntBASIC2.95□□□□□ -1.94
UBA52P62987 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 SNORA70E-201ENST00000384492 135 ntBASIC2.95□□□□□ -1.94
UBA52P62987 BX842559.1-201ENST00000419615 532 ntBASIC2.95□□□□□ -1.94
UBA52P62987 RPL23AP69-201ENST00000431134 458 ntBASIC2.95□□□□□ -1.94
UBA52P62987 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 AL354710.1-201ENST00000453641 246 ntBASIC2.95□□□□□ -1.94
UBA52P62987 POU5F1P7-201ENST00000508759 541 ntBASIC2.95□□□□□ -1.94
UBA52P62987 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 AC016550.3-201ENST00000515706 767 ntBASIC2.95□□□□□ -1.94
UBA52P62987 SNORA70.19-201ENST00000516717 90 ntBASIC2.95□□□□□ -1.94
UBA52P62987 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 IGHV3-76-201ENST00000522465 295 ntBASIC2.95□□□□□ -1.94
UBA52P62987 AC103843.2-201ENST00000530523 682 ntBASIC2.95□□□□□ -1.94
UBA52P62987 AC007458.1-201ENST00000542812 373 ntBASIC2.95□□□□□ -1.94
UBA52P62987 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.95□□□□□ -1.94
UBA52P62987 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.95□□□□□ -1.94
UBA52P62987 MIR4716-201ENST00000579628 84 ntBASIC2.95□□□□□ -1.94
UBA52P62987 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.95□□□□□ -1.94
UBA52P62987 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 OR2BH1P-201ENST00000608850 864 ntBASIC2.95□□□□□ -1.94
UBA52P62987 AL355365.1-201ENST00000616480 294 ntBASIC2.95□□□□□ -1.94
UBA52P62987 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 CFTRP2-201ENST00000634304 199 ntBASIC2.95□□□□□ -1.94
UBA52P62987 GABPAP-201ENST00000419271 1356 ntBASIC2.95□□□□□ -1.94
UBA52P62987 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.95□□□□□ -1.94
UBA52P62987 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBA52P62987 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
UBA52P62987 AC090337.1-201ENST00000579651 2074 ntBASIC2.94□□□□□ -1.94
UBA52P62987 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.94□□□□□ -1.94
UBA52P62987 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
UBA52P62987 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 SOD2P1-201ENST00000396543 562 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.94□□□□□ -1.94
UBA52P62987 OR2B8P-201ENST00000432841 938 ntBASIC2.94□□□□□ -1.94
UBA52P62987 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.94□□□□□ -1.94
UBA52P62987 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.94□□□□□ -1.94
UBA52P62987 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.94□□□□□ -1.94
UBA52P62987 RPL21P10-201ENST00000463521 490 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AC017015.1-201ENST00000477387 286 ntBASIC2.94□□□□□ -1.94
UBA52P62987 SETP6-201ENST00000479329 568 ntBASIC2.94□□□□□ -1.94
UBA52P62987 TMED11P-201ENST00000479478 690 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.94□□□□□ -1.94
UBA52P62987 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
UBA52P62987 RNU6-579P-201ENST00000516879 102 ntBASIC2.94□□□□□ -1.94
UBA52P62987 RN7SKP57-201ENST00000517248 293 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AC107934.2-201ENST00000518653 310 ntBASIC2.94□□□□□ -1.94
UBA52P62987 RANP9-201ENST00000519957 271 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AC026333.2-201ENST00000542164 106 ntBASIC2.94□□□□□ -1.94
UBA52P62987 DUXAP6-201ENST00000553858 601 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.94□□□□□ -1.94
UBA52P62987 NCAPGP2-201ENST00000557911 754 ntBASIC2.94□□□□□ -1.94
UBA52P62987 SNORD39.2-201ENST00000579995 76 ntBASIC2.94□□□□□ -1.94
UBA52P62987 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.94□□□□□ -1.94
UBA52P62987 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 AC010200.2-201ENST00000605098 235 ntBASIC2.94□□□□□ -1.94
UBA52P62987 MIR7851-201ENST00000610611 160 ntBASIC2.94□□□□□ -1.94
UBA52P62987 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.94□□□□□ -1.94
UBA52P62987 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.94□□□□□ -1.94
UBA52P62987 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
UBA52P62987 AL133383.2-201ENST00000622958 2336 ntBASIC2.94□□□□□ -1.94
UBA52P62987 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UBA52P62987 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.94□□□□□ -1.94
UBA52P62987 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
UBA52P62987 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.94□□□□□ -1.94
UBA52P62987 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBA52P62987 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UBA52P62987 AC009313.2-201ENST00000417893 1941 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms