Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPS28P62857 MAPK10-266ENST00000641066 6555 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 MTND4P8-201ENST00000514997 1362 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RPS28P62857 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RPS28P62857 RN7SKP205-201ENST00000410999 307 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.01□□□□□ -2.09
RPS28P62857 AC023141.1-201ENST00000419418 379 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AL672212.1-201ENST00000422246 400 ntBASIC2.01□□□□□ -2.09
RPS28P62857 FAM96AP1-201ENST00000430879 482 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC2.01□□□□□ -2.09
RPS28P62857 RNF2P1-201ENST00000442955 1010 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 HMGB1P5-202ENST00000451497 985 ntBASIC2.01□□□□□ -2.09
RPS28P62857 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 RPS29P19-201ENST00000479709 171 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC090096.1-201ENST00000489168 390 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AP002453.1-201ENST00000492327 668 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC006445.2-201ENST00000510061 472 ntBASIC2.01□□□□□ -2.09
RPS28P62857 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 TBCAP3-201ENST00000512475 312 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.01□□□□□ -2.09
RPS28P62857 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 AC107952.1-201ENST00000524200 376 ntBASIC2.01□□□□□ -2.09
RPS28P62857 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC2.01□□□□□ -2.09
RPS28P62857 MIR4800-201ENST00000537353 80 ntBASIC2.01□□□□□ -2.09
RPS28P62857 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.01□□□□□ -2.09
RPS28P62857 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC2.01□□□□□ -2.09
RPS28P62857 AL442163.2-201ENST00000553912 710 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.01□□□□□ -2.09
RPS28P62857 AC053481.3-201ENST00000577881 843 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.01□□□□□ -2.09
RPS28P62857 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC2.01□□□□□ -2.09
RPS28P62857 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 AC027243.2-201ENST00000602530 724 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AC098935.2-201ENST00000604222 466 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AL445222.1-201ENST00000607259 628 ntBASIC2.01□□□□□ -2.09
RPS28P62857 AL591516.1-201ENST00000611326 274 ntBASIC2.01□□□□□ -2.09
RPS28P62857 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 AC009950.2-201ENST00000636548 183 ntBASIC2.01□□□□□ -2.09
RPS28P62857 ZNF658B-202ENST00000615961 3375 ntBASIC2.01□□□□□ -2.09
RPS28P62857 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.01□□□□□ -2.09
RPS28P62857 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPS28P62857 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
RPS28P62857 AC116667.1-201ENST00000604855 2072 ntBASIC2□□□□□ -2.09
RPS28P62857 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
RPS28P62857 RNU6-1074P-201ENST00000383995 104 ntBASIC2□□□□□ -2.09
RPS28P62857 RNU6-761P-201ENST00000384148 107 ntBASIC2□□□□□ -2.09
RPS28P62857 RNU6-1072P-201ENST00000384703 107 ntBASIC2□□□□□ -2.09
RPS28P62857 RNU6-443P-201ENST00000384780 107 ntBASIC2□□□□□ -2.09
RPS28P62857 RNA5SP354-201ENST00000391247 136 ntBASIC2□□□□□ -2.09
RPS28P62857 Z97832.1-201ENST00000402490 328 ntBASIC2□□□□□ -2.09
RPS28P62857 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPS28P62857 AJ239321.1-201ENST00000424255 564 ntBASIC2□□□□□ -2.09
RPS28P62857 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AL353662.1-201ENST00000439099 327 ntBASIC2□□□□□ -2.09
RPS28P62857 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 AC092647.3-201ENST00000443044 633 ntBASIC2□□□□□ -2.09
RPS28P62857 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 AL162591.2-201ENST00000449634 317 ntBASIC2□□□□□ -2.09
RPS28P62857 AC006480.1-201ENST00000449887 378 ntBASIC2□□□□□ -2.09
RPS28P62857 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2□□□□□ -2.09
RPS28P62857 AL359385.1-201ENST00000456509 365 ntBASIC2□□□□□ -2.09
RPS28P62857 AC092798.1-201ENST00000458542 409 ntBASIC2□□□□□ -2.09
RPS28P62857 AC084754.1-201ENST00000463466 464 ntBASIC2□□□□□ -2.09
RPS28P62857 RPL36AP41-201ENST00000493820 306 ntBASIC2□□□□□ -2.09
RPS28P62857 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms