Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SPRYD7P1-201ENST00000443861 570 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 NOP56P2-201ENST00000447491 769 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AC079448.1-201ENST00000449377 373 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.66□□□□□ -1.66
CLRN1P58418 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.66□□□□□ -1.66
CLRN1P58418 AL359385.1-201ENST00000456509 365 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 OR2AO1P-201ENST00000476497 403 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 AC013356.1-201ENST00000489027 564 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AC069439.1-201ENST00000494739 167 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 AC108693.1-201ENST00000496068 432 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.66□□□□□ -1.66
CLRN1P58418 HMGB1P29-201ENST00000505659 499 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.66□□□□□ -1.66
CLRN1P58418 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 AP003181.2-201ENST00000528941 181 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 AK6P1-201ENST00000540219 478 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.66□□□□□ -1.66
CLRN1P58418 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.66□□□□□ -1.66
CLRN1P58418 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.66□□□□□ -1.66
CLRN1P58418 NF1P5-201ENST00000588287 448 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.66□□□□□ -1.66
CLRN1P58418 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.66□□□□□ -1.66
CLRN1P58418 AL139286.1-201ENST00000604465 483 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 AC080013.4-201ENST00000607624 649 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 HSPA8P14-201ENST00000552265 1805 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLRN1P58418 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.66□□□□□ -1.66
CLRN1P58418 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLRN1P58418 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLRN1P58418 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
CLRN1P58418 CASC19-221ENST00000641309 1382 ntBASIC4.65□□□□□ -1.66
CLRN1P58418 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.65□□□□□ -1.66
CLRN1P58418 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CLRN1P58418 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CLRN1P58418 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLRN1P58418 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLRN1P58418 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLRN1P58418 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 AC093775.1-201ENST00000624154 1868 ntBASIC4.65□□□□□ -1.66
CLRN1P58418 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLRN1P58418 KPNA2P2-201ENST00000419546 1489 ntBASIC4.65□□□□□ -1.66
CLRN1P58418 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLRN1P58418 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLRN1P58418 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 RNA5SP435-201ENST00000364044 108 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 PIGFP2-201ENST00000421400 651 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 ELOCP14-201ENST00000428070 331 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 RPL7L1P9-201ENST00000431298 745 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 FCF1P1-201ENST00000432690 571 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 ELOCP7-201ENST00000439968 331 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC090602.1-201ENST00000469695 252 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 OR52A4P-201ENST00000472867 958 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 RBM43P1-201ENST00000476891 1081 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 FTH1P24-201ENST00000503502 462 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 ARL4AP2-201ENST00000507378 601 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.65□□□□□ -1.67
CLRN1P58418 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.65□□□□□ -1.67
CLRN1P58418 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC126177.5-201ENST00000549599 178 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC006349.1-201ENST00000555526 235 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC022884.2-201ENST00000578535 580 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 NRBF2P1-201ENST00000587407 859 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms