Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLDN8P56748 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 MTCO1P43-201ENST00000431831 488 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 VDAC1P3-201ENST00000434069 851 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 MTCYBP31-201ENST00000438855 1122 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 RPL23AP15-201ENST00000450202 459 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 ACTG1P13-201ENST00000486987 1043 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC093267.1-201ENST00000489176 961 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 HMGB1P38-201ENST00000490557 577 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC010460.1-201ENST00000507087 466 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 PCBP2P3-201ENST00000509726 843 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN8P56748 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN8P56748 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 MIR4504-201ENST00000577413 92 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 AC005344.1-201ENST00000613391 459 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 MIR6758-201ENST00000620653 63 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN8P56748 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.47□□□□□ -1.85
CLDN8P56748 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN8P56748 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN8P56748 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CLDN8P56748 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN8P56748 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
CLDN8P56748 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
CLDN8P56748 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLDN8P56748 RPL32P3-201ENST00000359025 275 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 SNORD115-48-201ENST00000364764 76 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 RNA5SP283-201ENST00000365604 119 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 RNU6-1181P-201ENST00000384191 106 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 MIR30B-201ENST00000384850 88 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL136116.1-201ENST00000403591 381 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 SDCBPP2-201ENST00000424643 885 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 RPL21P66-201ENST00000426566 466 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL513175.1-201ENST00000431492 780 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 MRPS18BP2-201ENST00000434310 759 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 ELOCP13-201ENST00000443934 329 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 AC010655.1-201ENST00000449336 292 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AC233982.1-201ENST00000451247 436 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN8P56748 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN8P56748 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN8P56748 AC008885.2-201ENST00000509506 930 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN8P56748 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN8P56748 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN8P56748 MTCYBP28-201ENST00000566728 1132 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL354798.1-201ENST00000622505 329 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 RNA5SP196-201ENST00000625967 102 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN8P56748 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.46□□□□□ -1.86
CLDN8P56748 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CLDN8P56748 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN8P56748 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN8P56748 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLDN8P56748 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN8P56748 AP001350.1-201ENST00000601906 1524 ntBASIC3.45□□□□□ -1.86
CLDN8P56748 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN8P56748 AC007656.2-201ENST00000624902 4547 ntBASIC3.45□□□□□ -1.86
CLDN8P56748 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CLDN8P56748 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CLDN8P56748 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN8P56748 AC107081.3-201ENST00000612715 2034 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms