Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC013410.2-201ENST00000422627 201 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.25□□□□□ -1.73
LIMK1P53667 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC244505.3-201ENST00000454598 187 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 HMGN2P7-201ENST00000456186 273 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 PRDX3P4-201ENST00000470828 747 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC092451.1-201ENST00000480211 153 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC106872.2-201ENST00000494303 480 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC118282.2-201ENST00000508739 374 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 MTCO1P24-201ENST00000515438 1558 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 RNU6-1028P-201ENST00000517164 93 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC021451.1-201ENST00000523498 1129 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 MTND2P26-201ENST00000528255 1029 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.25□□□□□ -1.73
LIMK1P53667 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC087897.1-201ENST00000550134 156 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 SGO1P1-201ENST00000603525 1447 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AL139395.1-201ENST00000603662 160 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC024933.1-201ENST00000608472 348 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LIMK1P53667 AC010608.3-201ENST00000625048 527 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.25□□□□□ -1.73
LIMK1P53667 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.25□□□□□ -1.73
LIMK1P53667 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 ANKRD36P1-201ENST00000344424 659 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 RNU1-14P-201ENST00000362759 152 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
LIMK1P53667 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 MIR634-201ENST00000385208 97 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.24□□□□□ -1.73
LIMK1P53667 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 TMSB4XP8-201ENST00000402089 135 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 MTCO2P31-201ENST00000402702 684 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 RN7SKP182-201ENST00000410772 298 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 TMSB4XP6-201ENST00000415187 135 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 MTND4P3-201ENST00000417829 541 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 TMSB4XP1-201ENST00000424567 135 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.24□□□□□ -1.73
LIMK1P53667 NPM1P13-201ENST00000452663 865 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 snoU109.3-201ENST00000459477 145 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 AC126121.1-201ENST00000482313 553 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC090013.1-201ENST00000485147 480 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC079203.1-201ENST00000487972 404 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC078918.1-201ENST00000498515 228 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.24□□□□□ -1.73
LIMK1P53667 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 RNU6-488P-201ENST00000515918 99 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 RNU6-202P-201ENST00000515998 96 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 DUXAP2-201ENST00000519198 589 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 HIGD1AP6-201ENST00000521833 279 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.24□□□□□ -1.73
LIMK1P53667 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.24□□□□□ -1.73
LIMK1P53667 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 AC008759.1-201ENST00000589783 983 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC008687.2-201ENST00000597865 520 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 VN1R92P-201ENST00000598511 928 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AF131215.7-201ENST00000602443 707 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AL583856.2-201ENST00000606298 543 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.24□□□□□ -1.73
LIMK1P53667 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 AC012314.7-201ENST00000619693 93 ntBASIC4.24□□□□□ -1.73
LIMK1P53667 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms