Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC099063.3-201ENST00000642066 185 ntBASIC3.35□□□□□ -1.87
CENPFP49454 MTND5P24-201ENST00000438892 1767 ntBASIC3.35□□□□□ -1.87
CENPFP49454 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPFP49454 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPFP49454 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPFP49454 Y_RNA.508-201ENST00000384502 114 ntBASIC3.34□□□□□ -1.87
CENPFP49454 MIR1289-2-201ENST00000408360 111 ntBASIC3.34□□□□□ -1.87
CENPFP49454 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.34□□□□□ -1.87
CENPFP49454 AP003122.3-201ENST00000526316 255 ntBASIC3.34□□□□□ -1.87
CENPFP49454 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.34□□□□□ -1.87
CENPFP49454 AC026790.2-201ENST00000606282 430 ntBASIC3.34□□□□□ -1.87
CENPFP49454 AC099506.2-201ENST00000623074 221 ntBASIC3.34□□□□□ -1.87
CENPFP49454 MAPK10-320ENST00000641462 6696 ntBASIC3.34□□□□□ -1.87
CENPFP49454 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CENPFP49454 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CENPFP49454 RNA5SP445-201ENST00000515889 115 ntBASIC3.34□□□□□ -1.87
CENPFP49454 RNU6-548P-201ENST00000517083 115 ntBASIC3.34□□□□□ -1.87
CENPFP49454 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CENPFP49454 SULT1C2P2-201ENST00000562517 294 ntBASIC3.34□□□□□ -1.87
CENPFP49454 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPFP49454 AC015871.2-201ENST00000603605 948 ntBASIC3.34□□□□□ -1.87
CENPFP49454 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPFP49454 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CENPFP49454 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CENPFP49454 HSPA8P4-201ENST00000511877 1920 ntBASIC3.34□□□□□ -1.87
CENPFP49454 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.34□□□□□ -1.88
CENPFP49454 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.34□□□□□ -1.88
CENPFP49454 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CENPFP49454 AL360182.1-201ENST00000397433 468 ntBASIC3.34□□□□□ -1.88
CENPFP49454 AL136116.1-201ENST00000403591 381 ntBASIC3.34□□□□□ -1.88
CENPFP49454 USP12PY-201ENST00000427677 1064 ntBASIC3.34□□□□□ -1.88
CENPFP49454 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.88
CENPFP49454 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.34□□□□□ -1.88
CENPFP49454 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
CENPFP49454 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.34□□□□□ -1.88
CENPFP49454 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CENPFP49454 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CENPFP49454 MIR513A2-201ENST00000385249 127 ntBASIC3.33□□□□□ -1.88
CENPFP49454 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.33□□□□□ -1.88
CENPFP49454 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.33□□□□□ -1.88
CENPFP49454 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
CENPFP49454 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 AC117434.1-201ENST00000419971 836 ntBASIC3.33□□□□□ -1.88
CENPFP49454 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.33□□□□□ -1.88
CENPFP49454 RPL23AP73-201ENST00000492507 471 ntBASIC3.33□□□□□ -1.88
CENPFP49454 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.33□□□□□ -1.88
CENPFP49454 RFPL4AP3-201ENST00000515267 345 ntBASIC3.33□□□□□ -1.88
CENPFP49454 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.33□□□□□ -1.88
CENPFP49454 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.33□□□□□ -1.88
CENPFP49454 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CENPFP49454 Y_RNA.118-201ENST00000363300 101 ntBASIC3.32□□□□□ -1.88
CENPFP49454 RNU1-112P-201ENST00000364401 164 ntBASIC3.32□□□□□ -1.88
CENPFP49454 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CENPFP49454 RNA5SP146-201ENST00000410743 123 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 AC078785.3-201ENST00000476607 425 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC108210.2-201ENST00000503681 201 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC008565.1-201ENST00000509046 885 ntBASIC3.32□□□□□ -1.88
CENPFP49454 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 AC007390.2-201ENST00000606229 3803 ntBASIC3.32□□□□□ -1.88
CENPFP49454 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 RPS3AP26-201ENST00000398259 784 ntBASIC3.32□□□□□ -1.88
CENPFP49454 OR51A3P-201ENST00000413596 924 ntBASIC3.32□□□□□ -1.88
CENPFP49454 RPS26P47-201ENST00000427219 348 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.32□□□□□ -1.88
CENPFP49454 UBE2D3P1-201ENST00000436669 444 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 SNRPGP5-201ENST00000456003 220 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC010468.1-201ENST00000461022 817 ntBASIC3.32□□□□□ -1.88
CENPFP49454 RPS26P3-201ENST00000470205 348 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC004057.1-201ENST00000485827 348 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC112184.1-201ENST00000505179 312 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 RNA5SP24-201ENST00000516478 95 ntBASIC3.32□□□□□ -1.88
CENPFP49454 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.32□□□□□ -1.88
CENPFP49454 AL158827.2-201ENST00000602494 330 ntBASIC3.32□□□□□ -1.88
CENPFP49454 MIR486-1-201ENST00000612171 68 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AL158062.1-201ENST00000619632 745 ntBASIC3.32□□□□□ -1.88
CENPFP49454 AL691447.3-201ENST00000635020 330 ntBASIC3.32□□□□□ -1.88
CENPFP49454 Y_RNA.4-201ENST00000362333 112 ntBASIC3.32□□□□□ -1.88
CENPFP49454 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.32□□□□□ -1.88
CENPFP49454 AC106785.3-201ENST00000564064 847 ntBASIC3.32□□□□□ -1.88
CENPFP49454 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.32□□□□□ -1.88
CENPFP49454 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
CENPFP49454 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CENPFP49454 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CENPFP49454 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.31□□□□□ -1.88
CENPFP49454 RPS26P15-201ENST00000488067 348 ntBASIC3.31□□□□□ -1.88
CENPFP49454 AC099489.2-201ENST00000574976 260 ntBASIC3.31□□□□□ -1.88
CENPFP49454 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CENPFP49454 CR381670.1-201ENST00000624291 1693 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms