Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC079791.1-201ENST00000605356 973 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AC107294.3-201ENST00000609211 526 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AC110792.4-201ENST00000609843 298 ntBASIC3.96□□□□□ -1.78
SSR1P43307 AC083809.1-201ENST00000615051 472 ntBASIC3.96□□□□□ -1.78
SSR1P43307 MIR6875-201ENST00000617506 72 ntBASIC3.96□□□□□ -1.78
SSR1P43307 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSR1P43307 AC112200.1-201ENST00000625015 234 ntBASIC3.96□□□□□ -1.78
SSR1P43307 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSR1P43307 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSR1P43307 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SSR1P43307 AL355578.1-201ENST00000607405 1328 ntBASIC3.95□□□□□ -1.78
SSR1P43307 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 AC090337.1-201ENST00000579651 2074 ntBASIC3.95□□□□□ -1.78
SSR1P43307 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.95□□□□□ -1.78
SSR1P43307 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.95□□□□□ -1.78
SSR1P43307 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
SSR1P43307 MTATP6P31-201ENST00000406985 692 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.95□□□□□ -1.78
SSR1P43307 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.95□□□□□ -1.78
SSR1P43307 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC023347.2-201ENST00000433994 462 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.95□□□□□ -1.78
SSR1P43307 RPS27P5-201ENST00000444247 244 ntBASIC3.95□□□□□ -1.78
SSR1P43307 RPL7P52-201ENST00000449200 742 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC093392.2-201ENST00000450682 337 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 NF1P3-201ENST00000457709 450 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 AC010460.1-201ENST00000507087 466 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC090071.1-201ENST00000507713 644 ntBASIC3.95□□□□□ -1.78
SSR1P43307 TXNP6-201ENST00000510190 310 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC108157.1-201ENST00000510511 539 ntBASIC3.95□□□□□ -1.78
SSR1P43307 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
SSR1P43307 RN7SKP60-201ENST00000516985 239 ntBASIC3.95□□□□□ -1.78
SSR1P43307 RNA5SP380-201ENST00000517190 98 ntBASIC3.95□□□□□ -1.78
SSR1P43307 MIR2116-201ENST00000517221 80 ntBASIC3.95□□□□□ -1.78
SSR1P43307 RN7SKP289-201ENST00000517244 295 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.95□□□□□ -1.78
SSR1P43307 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 HIGD1AP5-201ENST00000529959 259 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AP002812.4-201ENST00000532139 286 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.95□□□□□ -1.78
SSR1P43307 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.95□□□□□ -1.78
SSR1P43307 PARP1P2-201ENST00000556806 195 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.95□□□□□ -1.78
SSR1P43307 AL133457.1-201ENST00000564251 987 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.95□□□□□ -1.78
SSR1P43307 AL163642.2-201ENST00000604722 1019 ntBASIC3.95□□□□□ -1.78
SSR1P43307 AC092354.2-201ENST00000607786 514 ntBASIC3.95□□□□□ -1.78
SSR1P43307 ZYXP1-201ENST00000617638 118 ntBASIC3.95□□□□□ -1.78
SSR1P43307 U6.48-201ENST00000618523 106 ntBASIC3.95□□□□□ -1.78
SSR1P43307 OR6C71P-202ENST00000641886 1107 ntBASIC3.95□□□□□ -1.78
SSR1P43307 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSR1P43307 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSR1P43307 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SSR1P43307 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSR1P43307 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSR1P43307 RN7SKP280-201ENST00000364196 304 ntBASIC3.94□□□□□ -1.78
SSR1P43307 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
SSR1P43307 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSR1P43307 SNORA11B-201ENST00000408175 129 ntBASIC3.94□□□□□ -1.78
SSR1P43307 MIR1303-201ENST00000408625 86 ntBASIC3.94□□□□□ -1.78
SSR1P43307 RNU4-74P-201ENST00000411280 161 ntBASIC3.94□□□□□ -1.78
SSR1P43307 RPL23AP69-201ENST00000431134 458 ntBASIC3.94□□□□□ -1.78
SSR1P43307 VDAC1P3-201ENST00000434069 851 ntBASIC3.94□□□□□ -1.78
SSR1P43307 CKS1BP5-201ENST00000434172 273 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AL691517.1-201ENST00000440833 1235 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.94□□□□□ -1.78
SSR1P43307 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.94□□□□□ -1.78
SSR1P43307 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.94□□□□□ -1.78
SSR1P43307 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.94□□□□□ -1.78
SSR1P43307 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
SSR1P43307 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.94□□□□□ -1.78
SSR1P43307 ARL2BPP6-201ENST00000512757 439 ntBASIC3.94□□□□□ -1.78
SSR1P43307 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
SSR1P43307 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.94□□□□□ -1.78
SSR1P43307 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSR1P43307 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.94□□□□□ -1.78
SSR1P43307 AL121766.1-201ENST00000547436 487 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.94□□□□□ -1.78
SSR1P43307 MTCO3P24-201ENST00000572729 782 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AC005242.1-201ENST00000585658 438 ntBASIC3.94□□□□□ -1.78
SSR1P43307 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.94□□□□□ -1.78
SSR1P43307 AL109653.1-201ENST00000603091 248 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AL390816.3-201ENST00000604527 1066 ntBASIC3.94□□□□□ -1.78
SSR1P43307 AC079684.1-201ENST00000621405 437 ntBASIC3.94□□□□□ -1.78
SSR1P43307 FP236240.3-201ENST00000623061 327 ntBASIC3.94□□□□□ -1.78
SSR1P43307 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.94□□□□□ -1.78
SSR1P43307 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.94□□□□□ -1.78
SSR1P43307 AC004925.1-201ENST00000624256 2706 ntBASIC3.94□□□□□ -1.78
SSR1P43307 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSR1P43307 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSR1P43307 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms