Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 TMSB10P2-201ENST00000416049 131 ntBASIC4.38□□□□□ -1.71
HADHAP40939 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.38□□□□□ -1.71
HADHAP40939 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 MTND2P5-201ENST00000432656 1006 ntBASIC4.38□□□□□ -1.71
HADHAP40939 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 USP9YP7-201ENST00000436723 430 ntBASIC4.38□□□□□ -1.71
HADHAP40939 RPL21P133-201ENST00000443666 476 ntBASIC4.38□□□□□ -1.71
HADHAP40939 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 COX6CP18-201ENST00000448769 222 ntBASIC4.38□□□□□ -1.71
HADHAP40939 USP9YP32-201ENST00000452432 430 ntBASIC4.38□□□□□ -1.71
HADHAP40939 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 PTGES3P5-201ENST00000455109 434 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC079804.1-201ENST00000461922 436 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC010307.1-201ENST00000467206 836 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC108734.3-201ENST00000481241 1165 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 ATP1B1P1-201ENST00000509767 915 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.38□□□□□ -1.71
HADHAP40939 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 OR4A12P-201ENST00000530847 918 ntBASIC4.38□□□□□ -1.71
HADHAP40939 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC136624.4-201ENST00000573044 370 ntBASIC4.38□□□□□ -1.71
HADHAP40939 MIR4277-201ENST00000578298 84 ntBASIC4.38□□□□□ -1.71
HADHAP40939 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC090948.1-201ENST00000607464 549 ntBASIC4.38□□□□□ -1.71
HADHAP40939 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.38□□□□□ -1.71
HADHAP40939 uc_338.13-201ENST00000618243 179 ntBASIC4.38□□□□□ -1.71
HADHAP40939 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.38□□□□□ -1.71
HADHAP40939 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 AC090897.3-201ENST00000636973 1157 ntBASIC4.38□□□□□ -1.71
HADHAP40939 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HADHAP40939 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.38□□□□□ -1.71
HADHAP40939 FAM91A3P-201ENST00000456826 2544 ntBASIC4.38□□□□□ -1.71
HADHAP40939 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HADHAP40939 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HADHAP40939 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.37□□□□□ -1.71
HADHAP40939 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HADHAP40939 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.37□□□□□ -1.71
HADHAP40939 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HADHAP40939 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.37□□□□□ -1.71
HADHAP40939 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HADHAP40939 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HADHAP40939 SNORA70.2-201ENST00000364506 135 ntBASIC4.37□□□□□ -1.71
HADHAP40939 MIR506-201ENST00000384998 124 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AL023807.1-201ENST00000407932 359 ntBASIC4.37□□□□□ -1.71
HADHAP40939 SNORA11F-201ENST00000408237 128 ntBASIC4.37□□□□□ -1.71
HADHAP40939 RNA5SP104-201ENST00000410989 118 ntBASIC4.37□□□□□ -1.71
HADHAP40939 MRPS36P1-201ENST00000421291 307 ntBASIC4.37□□□□□ -1.71
HADHAP40939 MTCO3P1-205ENST00000422088 832 ntBASIC4.37□□□□□ -1.71
HADHAP40939 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.37□□□□□ -1.71
HADHAP40939 USP9YP31-201ENST00000431405 881 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.37□□□□□ -1.71
HADHAP40939 RPEP2-201ENST00000432149 701 ntBASIC4.37□□□□□ -1.71
HADHAP40939 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.37□□□□□ -1.71
HADHAP40939 AC093155.1-201ENST00000440164 826 ntBASIC4.37□□□□□ -1.71
HADHAP40939 VN1R25P-201ENST00000443385 738 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AL009048.1-201ENST00000450437 298 ntBASIC4.37□□□□□ -1.71
HADHAP40939 HMGB3P30-201ENST00000457863 606 ntBASIC4.37□□□□□ -1.71
HADHAP40939 RPL5P24-201ENST00000463742 885 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AP000873.1-201ENST00000463987 400 ntBASIC4.37□□□□□ -1.71
HADHAP40939 RN7SL810P-201ENST00000493031 276 ntBASIC4.37□□□□□ -1.71
HADHAP40939 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HADHAP40939 PRELID3BP5-201ENST00000508612 460 ntBASIC4.37□□□□□ -1.71
HADHAP40939 PTGES3P3-201ENST00000511479 482 ntBASIC4.37□□□□□ -1.71
HADHAP40939 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.37□□□□□ -1.71
HADHAP40939 MTCO1P30-201ENST00000515244 580 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.37□□□□□ -1.71
HADHAP40939 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.37□□□□□ -1.71
HADHAP40939 AC092470.1-201ENST00000546187 132 ntBASIC4.37□□□□□ -1.71
HADHAP40939 PARP1P2-201ENST00000556806 195 ntBASIC4.37□□□□□ -1.71
HADHAP40939 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.37□□□□□ -1.71
HADHAP40939 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.37□□□□□ -1.71
HADHAP40939 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.37□□□□□ -1.71
HADHAP40939 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HADHAP40939 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.37□□□□□ -1.71
HADHAP40939 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.37□□□□□ -1.71
HADHAP40939 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.37□□□□□ -1.71
HADHAP40939 AL009028.1-201ENST00000604895 802 ntBASIC4.37□□□□□ -1.71
HADHAP40939 AC083809.1-201ENST00000615051 472 ntBASIC4.37□□□□□ -1.71
HADHAP40939 RMST_9.1-201ENST00000619945 193 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms