Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
RFC3P40938 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.41□□□□□ -1.86
RFC3P40938 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.41□□□□□ -1.86
RFC3P40938 SNORA62.6-201ENST00000606322 83 ntBASIC3.41□□□□□ -1.86
RFC3P40938 AC025016.1-201ENST00000616746 682 ntBASIC3.41□□□□□ -1.86
RFC3P40938 AC006065.5-201ENST00000623427 349 ntBASIC3.41□□□□□ -1.86
RFC3P40938 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.41□□□□□ -1.86
RFC3P40938 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
RFC3P40938 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.41□□□□□ -1.86
RFC3P40938 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFC3P40938 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
RFC3P40938 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFC3P40938 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.4□□□□□ -1.86
RFC3P40938 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RFC3P40938 SNORA70E-201ENST00000384492 135 ntBASIC3.4□□□□□ -1.87
RFC3P40938 MIR7-3-201ENST00000384898 110 ntBASIC3.4□□□□□ -1.87
RFC3P40938 ATP5F1P4-201ENST00000397288 746 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 TCEA1P2-201ENST00000420496 906 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AL049610.1-201ENST00000423374 372 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC3P40938 TXNP1-201ENST00000441872 371 ntBASIC3.4□□□□□ -1.87
RFC3P40938 RPL6P5-201ENST00000445678 828 ntBASIC3.4□□□□□ -1.87
RFC3P40938 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.4□□□□□ -1.87
RFC3P40938 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.4□□□□□ -1.87
RFC3P40938 PRSS3P4-201ENST00000453323 162 ntBASIC3.4□□□□□ -1.87
RFC3P40938 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.4□□□□□ -1.87
RFC3P40938 AC104689.1-201ENST00000473356 768 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
RFC3P40938 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 AC005351.1-201ENST00000511152 786 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AC008011.1-201ENST00000545989 227 ntBASIC3.4□□□□□ -1.87
RFC3P40938 CCNG2P1-201ENST00000549521 1000 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AL389895.1-201ENST00000554127 252 ntBASIC3.4□□□□□ -1.87
RFC3P40938 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.4□□□□□ -1.87
RFC3P40938 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
RFC3P40938 AC018618.2-201ENST00000604770 446 ntBASIC3.4□□□□□ -1.87
RFC3P40938 BX322635.1-201ENST00000605804 496 ntBASIC3.4□□□□□ -1.87
RFC3P40938 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
RFC3P40938 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.4□□□□□ -1.87
RFC3P40938 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RFC3P40938 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFC3P40938 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC3P40938 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC3P40938 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFC3P40938 Y_RNA.333-201ENST00000365274 102 ntBASIC3.39□□□□□ -1.87
RFC3P40938 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFC3P40938 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
RFC3P40938 RNU2-21P-201ENST00000410368 188 ntBASIC3.39□□□□□ -1.87
RFC3P40938 RNA5SP44-201ENST00000410446 133 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 VTA1P1-201ENST00000414044 866 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC3P40938 ZNF965P-201ENST00000432501 817 ntBASIC3.39□□□□□ -1.87
RFC3P40938 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 AC096638.2-201ENST00000434965 711 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 AC092685.1-201ENST00000447960 1243 ntBASIC3.39□□□□□ -1.87
RFC3P40938 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC3P40938 CFTRP1-201ENST00000456646 183 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AL035404.1-201ENST00000497982 568 ntBASIC3.39□□□□□ -1.87
RFC3P40938 TRAV31-201ENST00000502780 342 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.39□□□□□ -1.87
RFC3P40938 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.39□□□□□ -1.87
RFC3P40938 AC026784.1-201ENST00000507986 352 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC3P40938 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
RFC3P40938 AC008494.2-201ENST00000514544 370 ntBASIC3.39□□□□□ -1.87
RFC3P40938 RN7SKP18-201ENST00000516005 275 ntBASIC3.39□□□□□ -1.87
RFC3P40938 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 AC074029.1-201ENST00000552531 1044 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFC3P40938 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 AC099489.2-201ENST00000574976 260 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 MIR3944-201ENST00000581277 108 ntBASIC3.39□□□□□ -1.87
RFC3P40938 MRPS35P3-201ENST00000603189 709 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC079610.2-201ENST00000604818 690 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC012468.1-201ENST00000604888 430 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.39□□□□□ -1.87
RFC3P40938 AL357559.1-201ENST00000622228 274 ntBASIC3.39□□□□□ -1.87
RFC3P40938 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms