Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL445529.1-201ENST00000398713 389 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 RPL7P36-201ENST00000444633 681 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 RPS26P24-201ENST00000497656 331 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 AC021146.1-201ENST00000511202 716 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN4AP35499 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN4AP35499 AC245100.7-201ENST00000609678 442 ntBASIC3.86□□□□□ -1.79
SCN4AP35499 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN4AP35499 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SCN4AP35499 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN4AP35499 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
SCN4AP35499 AC087190.4-201ENST00000574616 8334 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 MIR1261-201ENST00000408659 82 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCN4AP35499 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN4AP35499 AC006989.1-201ENST00000427212 131 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 AC093156.1-201ENST00000440382 670 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 AL135938.1-201ENST00000443141 297 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.85□□□□□ -1.79
SCN4AP35499 HMGB1P6-201ENST00000569046 646 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN4AP35499 MIR4769-201ENST00000584126 77 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN4AP35499 AL158062.1-201ENST00000619632 745 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 AC138393.1-206ENST00000540997 1886 ntBASIC3.85□□□□□ -1.79
SCN4AP35499 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN4AP35499 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN4AP35499 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN4AP35499 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN4AP35499 LINC02471-203ENST00000641941 4752 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SCN4AP35499 RPS4XP8-201ENST00000402039 771 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 AL109933.2-201ENST00000452651 260 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 AC005229.2-201ENST00000456995 399 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 RNA5SP367-201ENST00000516557 118 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 AL512310.1-201ENST00000548639 172 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN4AP35499 AC100793.4-201ENST00000613683 429 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 AC022960.2-201ENST00000616300 666 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCN4AP35499 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.79
SCN4AP35499 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN4AP35499 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN4AP35499 SPATA2P1-201ENST00000431223 2055 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.8
SCN4AP35499 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.84□□□□□ -1.8
SCN4AP35499 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SCN4AP35499 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 HSPD1P16-201ENST00000402302 394 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.84□□□□□ -1.8
SCN4AP35499 AC019097.1-201ENST00000424783 735 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 AL035407.1-201ENST00000429211 571 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 AC108734.1-201ENST00000439549 399 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.8
SCN4AP35499 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.84□□□□□ -1.8
SCN4AP35499 MTCO3P17-201ENST00000443775 513 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 AL357552.1-201ENST00000445254 415 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.84□□□□□ -1.8
SCN4AP35499 YWHAEP4-201ENST00000505390 198 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.84□□□□□ -1.8
SCN4AP35499 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.84□□□□□ -1.8
SCN4AP35499 RFPL1S-203ENST00000539579 330 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 ELOCP29-201ENST00000588193 334 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 BNIP3P10-201ENST00000605360 577 ntBASIC3.84□□□□□ -1.8
SCN4AP35499 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCN4AP35499 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN4AP35499 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN4AP35499 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SCN4AP35499 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN4AP35499 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN4AP35499 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN4AP35499 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AC073069.1-201ENST00000428657 441 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 NPM1P13-201ENST00000452663 865 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AL035404.1-201ENST00000497982 568 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AC010306.1-201ENST00000523223 1117 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN4AP35499 AL139174.1-201ENST00000531489 886 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN4AP35499 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN4AP35499 VN1R90P-201ENST00000595717 726 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN4AP35499 AC015849.2-201ENST00000605738 409 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
SCN4AP35499 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms